RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GOLGA6L4A6NEF3 574 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 OGTO15294 1046 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 TADA2AO75478 443 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 GCNT3O95395 438 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 SOD2P04179 222 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 PFKFB1P16118 471 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 SYKP43405 635 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 NRIP1P48552 1158 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 OSTNP61366 133 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 ASIC1P78348 528 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 NAB2Q15742 525 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 PLPP4Q5VZY2 271 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 DCLRE1AQ6PJP8 1040 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 TMEM184AQ6ZMB5 413 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 UNC13DQ70J99 1090 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 RBM23Q86U06 439 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 TMEM173Q86WV6 379 aaPredicted RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 CEP120Q8N960 986 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 SNX27Q96L92 541 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 PPP1R10Q96QC0 940 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 IGFLR1Q9H665 355 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 MRPL17Q9NRX2 175 aaKnown RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 CLDND1Q9NY35 253 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 CNTN3Q9P232 1028 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 FAM50BQ9Y247 325 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
TPM4-207ENST00000588032 MYH11P35749 1972 aa11.03□□□□□ -0.64
TPM4-207ENST00000588032 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 KIAA0391O15091 583 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 EIF3DO15371 548 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM4-207ENST00000588032 CSPG5O95196 566 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 EFEMP2O95967 443 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 LDHAP00338 332 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 ADRB2P07550 413 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 HARSP12081 509 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 KCNA5P22460 613 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 RPL9P32969 192 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 COASYQ13057 564 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 SLC10A6Q3KNW5 377 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 EP400NLQ6ZTU2 488 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 PPFIBP1Q86W92 1011 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 RNF168Q8IYW5 571 aaPredicted RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 BCL7CQ8WUZ0 217 aaPredicted RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 PAGE5Q96GU1 130 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 MSTO1Q9BUK6 570 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 EMILIN2Q9BXX0 1053 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 HAPLN2Q9GZV7 340 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 RPF1Q9H9Y2 349 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 TBC1D7Q9P0N9 293 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 SERTAD1Q9UHV2 236 aa11.02□□□□□ -0.65
TPM4-207ENST00000588032 AGO2Q9UKV8 859 aaKnown RBP11.02□□□□□ -0.65
TPM4-207ENST00000588032 SF3B1O75533 1304 aaKnown RBP eCLIP11.02□□□□□ -0.653e-6■■■■■ 44.6
TPM4-207ENST00000588032 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.01□□□□□ -0.65
TPM4-207ENST00000588032 TTC26A0AVF1 554 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 HIDE1A8MVS5 230 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 PER2O15055 1255 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 XPOTO43592 962 aaKnown RBP11.01□□□□□ -0.65
TPM4-207ENST00000588032 TRAPPC3O43617 180 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
TPM4-207ENST00000588032 FAM189A1O60320 539 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 C1RP00736 705 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 URODP06132 367 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 BMP1P13497 986 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 CYP3A5P20815 502 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 GARTP22102 1010 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 LTBRP36941 435 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 AFMP43652 599 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 GLUD2P49448 558 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 NDUFV1P49821 464 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 NDUFA8P51970 172 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 SNRPFP62306 86 aaKnown RBP11.01□□□□□ -0.65
TPM4-207ENST00000588032 DSG1Q02413 1049 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 CREMQ03060 361 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 TFF2Q03403 129 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 PPP2R3AQ06190 1150 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 EHHADHQ08426 723 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 PSMD2Q13200 908 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 KCNC3Q14003 757 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 UPP1Q16831 310 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 USP41Q3LFD5 358 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 GLRA4Q5JXX5 417 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 KANK3Q6NY19 840 aa11.01□□□□□ -0.65
TPM4-207ENST00000588032 FUT10Q6P4F1 479 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms