RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CDT1Q9H211 546 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 PLEKHA4Q9H4M7 779 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 KCNK12Q9HB15 430 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 PIDD1Q9HB75 910 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 GOLGA2P5Q9HBQ8 144 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 KMT5AQ9NQR1 393 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 TNFSF13BQ9Y275 285 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 KIF3AQ9Y496 699 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 PIEZO1Q92508 2521 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 H3BQV1 296 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 OSTNP61366 133 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
VMP1-206ENST00000587945 CREMQ03060 361 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 DMP1Q13316 513 aaPredicted RBP15.76■□□□□ 0.11
VMP1-206ENST00000587945 TDGQ13569 410 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 PSMD5Q16401 504 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 CYP26C1Q6V0L0 522 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 PNMA5Q96PV4 448 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 PPP1R10Q96QC0 940 aaKnown RBP15.76■□□□□ 0.11
VMP1-206ENST00000587945 FAM86C1Q9NVL1 165 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 ARHGAP28Q9P2N2 729 aa15.76■□□□□ 0.11
VMP1-206ENST00000587945 PHLPP2Q6ZVD8 1323 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 SLC16A4O15374 487 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 NARSO43776 548 aaKnown RBP15.75■□□□□ 0.11
VMP1-206ENST00000587945 B3GAT3O94766 335 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 CLCNKBP51801 687 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 ZNF568Q3ZCX4 644 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 RILPL1Q5EBL4 403 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 TMEM105Q8N8V8 129 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 ST13P5Q8NFI4 369 aaPredicted RBP15.75■□□□□ 0.11
VMP1-206ENST00000587945 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 PRRX2Q99811 253 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
VMP1-206ENST00000587945 RHOBTB2Q9BYZ6 727 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 PRKD2Q9BZL6 878 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 TMEM134Q9H6X4 195 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 PTPRHQ9HD43 1115 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 ZDHHC7Q9NXF8 308 aa15.75■□□□□ 0.11
VMP1-206ENST00000587945 SMIM28A0A1B0GU29 152 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 I3L4J1 428 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 ZMYND10O75800 440 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 PAPLNO95428 1278 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 C1RP00736 705 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 GRM5P41594 1212 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 SOX4Q06945 474 aaPredicted RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 DCLRE1AQ6PJP8 1040 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 GET4Q7L5D6 327 aaPredicted RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 APBB1IPQ7Z5R6 666 aaPredicted RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 FLCNQ8NFG4 579 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 STAMQ92783 540 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 CCDC94Q9BW85 323 aaPredicted RBP15.74■□□□□ 0.11
VMP1-206ENST00000587945 MFSD1Q9H3U5 465 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 FBXW11Q9UKB1 542 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 DUSP12Q9UNI6 340 aa15.74■□□□□ 0.11
VMP1-206ENST00000587945 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 H0Y858 1186 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 ABLIM1O14639 778 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 FGFR3P22607 806 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 GUCY2CP25092 1073 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 TKTP29401 623 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 BRCC3P46736 316 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 YARSP54577 528 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 NTHL1P78549 312 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 ELAVL2Q12926 359 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 UPP1Q16831 310 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 HYIQ5T013 277 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 ALKAL1Q6UXT8 129 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 RSPO2Q6UXX9 243 aaPredicted RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 GRASPQ7Z6J2 395 aaPredicted RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 ZMAT2Q96NC0 199 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 IGSF9Q9P2J2 1179 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 EPS15L1Q9UBC2 864 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 FBXL21Q9UKT6 434 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
VMP1-206ENST00000587945 RBM19Q9Y4C8 960 aaKnown RBP15.73■□□□□ 0.11
VMP1-206ENST00000587945 TMEM189-UBE2V1I3L0A0 370 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 CCL16O15467 120 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 MEFVO15553 781 aaPredicted RBP15.72■□□□□ 0.11
VMP1-206ENST00000587945 GALR2O43603 387 aaPredicted RBP15.72■□□□□ 0.11
VMP1-206ENST00000587945 C8AP07357 584 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 PLA2G4BP0C869 781 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 PROZP22891 400 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 OR1D2P34982 312 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 SLC12A3P55017 1021 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 SEZ6Q53EL9 994 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 XKR4Q5GH76 650 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 LIN9Q5TKA1 542 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 CWF19L1Q69YN2 538 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms