RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 USP15Q9Y4E8 981 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-206ENST00000587730 UBIAD1Q9Y5Z9 338 aa19.87■□□□□ 0.77
DDX39A-206ENST00000587730 ACTL7BQ9Y614 415 aa19.87■□□□□ 0.77
DDX39A-206ENST00000587730 SMIM23A6NLE4 172 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 DHX15O43143 795 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 SNX3O60493 162 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 YWHABP31946 246 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 NF2P35240 595 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 UBXN2AP68543 259 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 RRP1BQ14684 758 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 CLEC16AQ2KHT3 1053 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 RHBDF2Q6PJF5 856 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 SLC47A2Q86VL8 602 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 RELL1Q8IUW5 271 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 MAP4K3Q8IVH8 894 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 TRAIPQ9BWF2 469 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 LRRC4CQ9HCJ2 640 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ASIC3Q9UHC3 531 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 NDC80O14777 642 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 BACH1O14867 736 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 SORBS3O60504 671 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 TTC4O95801 387 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 MAPK4P31152 587 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 PSMC5P62195 406 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ELF3P78545 371 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 EXOC3L1Q86VI1 746 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 RIBC1Q8N443 379 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 HELQQ8TDG4 1101 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ACER1Q8TDN7 264 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 PARD3BQ8TEW8 1205 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 SPIRE2Q8WWL2 714 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ARHGEF2Q92974 986 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ZNF622Q969S3 477 aaKnown RBP eCLIP19.86■□□□□ 0.775e-9■■□□□ 12.8
DDX39A-206ENST00000587730 GRAMD1AQ96CP6 724 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 IFT74Q96LB3 600 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 ELAC2Q9BQ52 826 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 CDC42EP4Q9H3Q1 356 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 CD248Q9HCU0 757 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 TPX2Q9ULW0 747 aaKnown RBP19.86■□□□□ 0.77
DDX39A-206ENST00000587730 PTPN22Q9Y2R2 807 aa19.86■□□□□ 0.77
DDX39A-206ENST00000587730 OAS1P00973 400 aaKnown RBP19.85■□□□□ 0.77
DDX39A-206ENST00000587730 ATF2P15336 505 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 SCP2P22307 547 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 TKFCQ3LXA3 575 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 SLC30A10Q6XR72 485 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 ATL2Q8NHH9 583 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 MFSD14AQ96MC6 490 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 FBXL18Q96ME1 805 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 RAB20Q9NX57 234 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.85■□□□□ 0.77
DDX39A-206ENST00000587730 LGALS13Q9UHV8 139 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 KCNG1Q9UIX4 513 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 MCM8Q9UJA3 840 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 CCPG1Q9ULG6 757 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 TBX20Q9UMR3 447 aa19.85■□□□□ 0.77
DDX39A-206ENST00000587730 MYH11P35749 1972 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 H0YCG3 227 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 DKC1O60832 514 aaKnown RBP eCLIP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 MAP2K1Q02750 393 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 NR1H3Q13133 447 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 DMP1Q13316 513 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 SPRED3Q2MJR0 410 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 PPP1R21Q6ZMI0 780 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 ARHGEF18Q6ZSZ5 1173 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 CCDC25Q86WR0 208 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 CCDC89Q8N998 374 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 PLEKHO2Q8TD55 490 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 DDX1Q92499 740 aaKnown RBP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 CCDC113Q9H0I3 377 aa19.84■□□□□ 0.77
DDX39A-206ENST00000587730 ZNF646O15015 1829 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-206ENST00000587730 H0YIN7 160 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 CETN2P41208 172 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 PTGER2P43116 358 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 KRT76Q01546 638 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 MTMR1Q13613 665 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 TRIM72Q6ZMU5 477 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 PRMT6Q96LA8 375 aaPredicted RBP19.83■□□□□ 0.77
DDX39A-206ENST00000587730 ATP6V0A4Q9HBG4 840 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 KIAA1586Q9HCI6 787 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 ARL2BPQ9Y2Y0 163 aa19.83■□□□□ 0.77
DDX39A-206ENST00000587730 TCRBV7S2A1N4TA0A589 114 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 WDR64B1ANS9 1081 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 DDX39AO00148 427 aaKnown RBP19.83■□□□□ 0.76
DDX39A-206ENST00000587730 CLDN3O15551 220 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 PSTPIP1O43586 416 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 CDH16O75309 829 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 ATP6V1G2O95670 118 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 ADRB2P07550 413 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 SLCO1A2P46721 670 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 PEX3P56589 373 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 STAT4Q14765 748 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 GRIPAP1Q4V328 841 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 C7orf43Q8WVR3 580 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 KAT5Q92993 513 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 CNKSR1Q969H4 720 aa19.83■□□□□ 0.76
DDX39A-206ENST00000587730 NTPCRQ9BSD7 190 aaKnown RBP19.83■□□□□ 0.76
DDX39A-206ENST00000587730 MOV10L1Q9BXT6 1211 aaKnown RBP19.83■□□□□ 0.76
DDX39A-206ENST00000587730 ANAPC7Q9UJX3 599 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms