RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	AFF1	P51825	1210 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ITIH3	Q06033	890 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PPP2R3A	Q06190	1150 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SMAD2	Q15796	467 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CLUL1	Q15846	466 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SLFN12L	Q6IEE8	588 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	LLGL2	Q6P1M3	1020 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TMEM184A	Q6ZMB5	413 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DYM	Q7RTS9	669 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TAS1R3	Q7RTX0	852 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PDILT	Q8N807	584 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CCDC34	Q96HJ3	373 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SNX27	Q96L92	541 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	NECTIN4	Q96NY8	510 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ST6GALNAC4	Q9H4F1	302 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PLEKHA5	Q9HAU0	1116 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PTPRH	Q9HD43	1115 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	OLFML3	Q9NRN5	406 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MARCH5	Q9NX47	278 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TFIP11	Q9UBB9	837 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	HCFC2	Q9Y5Z7	792 aa		12.81	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TMEM189-UBE2V1	I3L0A0	370 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PTGES	O14684	152 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	LINC01565	O15544	149 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MBTPS2	O43462	519 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	B4GALT3	O60512	393 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GLP2R	O95838	553 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	OSTN	P61366	133 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	POSTN	Q15063	836 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ANKRD54	Q6NXT1	300 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	USP49	Q70CQ1	688 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SFR1	Q86XK3	245 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ADHFE1	Q8IWW8	467 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CEP57L1	Q8IYX8	460 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GSTCD	Q8NEC7	633 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MSLNL	Q96KJ4	702 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	RIPOR3	Q96MK2	946 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MSTO1	Q9BUK6	570 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SFXN1	Q9H9B4	322 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CNTN3	Q9P232	1028 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	USP20	Q9Y2K6	914 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PCDHB13	Q9Y5F0	798 aa		12.8	□□□□□ -0.36
PRKCSH-206	ENST00000587509	OGT	O15294	1046 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CLASP2	O75122	1294 aa	Known RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	B3GAT3	O94766	335 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	KIF4A	O95239	1232 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GCNT3	O95395	438 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GLUD1	P00367	558 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	C1R	P00736	705 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	IL9	P15248	144 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	KCNE1	P15382	129 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	LTBR	P36941	435 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GTF2B	Q00403	316 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DSG1	Q02413	1049 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DNM1	Q05193	864 aa	Known RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GLRA4	Q5JXX5	417 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CD302	Q8IX05	232 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DHX58	Q96C10	678 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SPATA32	Q96LK8	384 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PPP1R10	Q96QC0	940 aa	Known RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ACCS	Q96QU6	501 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TTPAL	Q9BTX7	342 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	TMEM206	Q9H813	350 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	RPF1	Q9H9Y2	349 aa	Known RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CLEC1B	Q9P126	229 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	USP15	Q9Y4E8	981 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	NUB1	Q9Y5A7	615 aa		12.79	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SMIM28	A0A1B0GU29	152 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ARHGEF37	A1IGU5	675 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MYMK	A6NI61	221 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	C2CD2L	O14523	706 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ABLIM1	O14639	778 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	RPL9	P32969	192 aa	Known RBP	12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	ASIC1	P78348	528 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	NUCB2	P80303	420 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DLX2	Q07687	328 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CBX2	Q14781	532 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	XKR4	Q5GH76	650 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	DCLRE1A	Q6PJP8	1040 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	RNF168	Q8IYW5	571 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	SYCP3	Q8IZU3	236 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	GJD3	Q8N144	294 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	CEP120	Q8N960	986 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	LRRC15	Q8TF66	581 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	AUTS2	Q8WXX7	1259 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	FBXL18	Q96ME1	805 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	PANK4	Q9NVE7	773 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	MIOS	Q9NXC5	875 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	FNIP2	Q9P278	1114 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	USP25	Q9UHP3	1055 aa		12.78	□□□□□ -0.36
PRKCSH-206	ENST00000587509	FRMD3	A2A2Y4	597 aa		12.77	□□□□□ -0.37

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