RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 GTF2BQ00403 316 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 MCL1Q07820 350 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 SEZ6Q53EL9 994 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 ZC2HC1CQ53FD0 456 aaPredicted RBP16.2■□□□□ 0.18
ATG4D-207ENST00000587256 RESP18Q5W5W9 173 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
ATG4D-207ENST00000587256 HASPINQ8TF76 798 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 HVCN1Q96D96 273 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 TBC1D7Q9P0N9 293 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 CD207Q9UJ71 328 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 ADAM28Q9UKQ2 775 aa16.2■□□□□ 0.18
ATG4D-207ENST00000587256 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■■■■ 122.8
ATG4D-207ENST00000587256 C2CD2LO14523 706 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 TADA2AO75478 443 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 KIF4AO95239 1232 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 GCNT3O95395 438 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 IL9P15248 144 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 ASIC1P78348 528 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 AMPD3Q01432 767 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 SMAD4Q13485 552 aaKnown RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 HERC4Q5GLZ8 1057 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 KIAA1841Q6NSI8 718 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 FUT10Q6P4F1 479 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 CCDC65Q8IXS2 484 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 VN1R2Q8NFZ6 395 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 NECAB3Q96P71 396 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 PAAF1Q9BRP4 392 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 PYM1Q9BRP8 204 aaKnown RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 MSTO1Q9BUK6 570 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 EMILIN2Q9BXX0 1053 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 ST6GALNAC4Q9H4F1 302 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 MAGEF1Q9HAY2 307 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 MRPL17Q9NRX2 175 aaKnown RBP16.19■□□□□ 0.18
ATG4D-207ENST00000587256 SLC38A7Q9NVC3 462 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 IRAK3Q9Y616 596 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 VCANP13611 3396 aa16.19■□□□□ 0.18
ATG4D-207ENST00000587256 SMIM28A0A1B0GU29 152 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 CLTAP09496 248 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 CXCL8P10145 99 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 NAB2Q15742 525 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 ZNF720Q7Z2F6 126 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 CASP10Q92851 521 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 OLFML3Q9NRN5 406 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 SSX2IPQ9Y2D8 614 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 HCFC2Q9Y5Z7 792 aa16.18■□□□□ 0.18
ATG4D-207ENST00000587256 TCF20Q9UGU0 1960 aaKnown RBP16.18■□□□□ 0.18
ATG4D-207ENST00000587256 FRMD3A2A2Y4 597 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 GRXCR2A6NFK2 248 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 OGTO15294 1046 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 CLASP2O75122 1294 aaKnown RBP16.17■□□□□ 0.18
ATG4D-207ENST00000587256 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 COASYQ13057 564 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 KYAT1Q16773 422 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-207ENST00000587256 MSLNLQ96KJ4 702 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 B3GALT6Q96L58 329 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 UROC1Q96N76 676 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 GPR62Q9BZJ7 368 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 TRIM9Q9C026 710 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 HAPLN2Q9GZV7 340 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-207ENST00000587256 GOLGA2P5Q9HBQ8 144 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
ATG4D-207ENST00000587256 CITO14578 2027 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-207ENST00000587256 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 MBTPS2O43462 519 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 PPP1R37O75864 691 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 MYBP10242 640 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 KCNE1P15382 129 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 PFKFB1P16118 471 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 KLRC2P26717 231 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 TNFSF9P41273 254 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 CLCNKBP51801 687 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 NUCB2P80303 420 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ELAVL2Q12926 359 aaKnown RBP16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ALCAMQ13740 583 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 USP41Q3LFD5 358 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 XKR4Q5GH76 650 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 L1TD1Q5T7N2 865 aaKnown RBP16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ADALQ6DHV7 355 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ANKRD54Q6NXT1 300 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 SLC39A4Q6P5W5 647 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ALKAL1Q6UXT8 129 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 STXBP4Q6ZWJ1 553 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 TAS1R1Q7RTX1 841 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 CEP57L1Q8IYX8 460 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms