RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 OFD1O75665 1012 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 PIGRP01833 764 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 MYBP10242 640 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 PLCB3Q01970 1234 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 UBE3AQ05086 875 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 ADAM15Q13444 863 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 TMEM173Q86WV6 379 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-205ENST00000586477 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 ABI1Q8IZP0 508 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 SLC39A11Q8N1S5 342 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 SCFD1Q8WVM8 642 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 CPB2Q96IY4 423 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 CD320Q9NPF0 282 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 CLDND1Q9NY35 253 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 GDAQ9Y2T3 454 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 TTLL13PA6NNM8 815 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 PDXKO00764 312 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 CALUO43852 315 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-205ENST00000586477 TOM1L1O75674 476 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
ATG4D-205ENST00000586477 GLP2RO95838 553 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 IL9P15248 144 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 COL9A1P20849 921 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 PRCPP42785 496 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 RAB27AP51159 221 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 CASP5P51878 434 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 LRRC63Q05C16 580 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 TYRO3Q06418 890 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 ZC2HC1CQ53FD0 456 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-205ENST00000586477 ADSSL1Q8N142 457 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-205ENST00000586477 ZNF558Q96NG5 402 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 IGFLR1Q9H665 355 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 TLR9Q9NR96 1032 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
ATG4D-205ENST00000586477 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 EDN1P05305 212 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 SKIP12755 728 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 ARF4P18085 180 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-205ENST00000586477 RPL13P26373 211 aaKnown RBP17.56■□□□□ 0.4
ATG4D-205ENST00000586477 ERCC5P28715 1186 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-205ENST00000586477 NRIP1P48552 1158 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 BCAR1P56945 870 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
ATG4D-205ENST00000586477 PAK1Q13153 545 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 KYAT1Q16773 422 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 NOMO2Q5JPE7 1267 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 ATF7IP2Q5U623 682 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 PTCRAQ6ISU1 281 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-205ENST00000586477 EP400NLQ6ZTU2 488 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 ZNF280BQ86YH2 543 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 HACE1Q8IYU2 909 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 VN1R2Q8NFZ6 395 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 C1QTNF1Q9BXJ1 281 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 NRDE2Q9H7Z3 1164 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 CLEC1BQ9P126 229 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 DNAJB4Q9UDY4 337 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 LZTS1Q9Y250 596 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 TNFSF13BQ9Y275 285 aa17.56■□□□□ 0.4
ATG4D-205ENST00000586477 TDRD15B5MCY1 1934 aaKnown RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 A0A1B0GUA9 196 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 FGFR1OPO95684 399 aaKnown RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 MYBPC2Q14324 1141 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 EDRF1Q3B7T1 1238 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 DPCR1Q3MIW9 517 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 SLC27A1Q6PCB7 646 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 CDR2LQ86X02 465 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 NELFCDQ8IXH7 590 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 SMYD4Q8IYR2 804 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 TMEM174Q8WUU8 243 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 MSLNLQ96KJ4 702 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 ACO2Q99798 780 aaKnown RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 TCHPQ9BT92 498 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 VN1R3Q9BXE9 311 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 MRPL9Q9BYD2 267 aaKnown RBP17.55■□□□□ 0.4
ATG4D-205ENST00000586477 SPG21Q9NZD8 308 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 TRAF3IP3Q9Y228 551 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 INPP5FQ9Y2H2 1132 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 HES2Q9Y543 173 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 IPPQ9Y573 584 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 TRIOO75962 3097 aa17.55■□□□□ 0.4
ATG4D-205ENST00000586477 HIDE1A8MVS5 230 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 PER2O15055 1255 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 CLDN3O15551 220 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 NCK2O43639 380 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 DDHD2O94830 711 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 LDHAP00338 332 aaKnown RBP17.54■□□□□ 0.4
ATG4D-205ENST00000586477 BMP6P22004 513 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 GARTP22102 1010 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms