RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RIOK3O14730 519 aaKnown RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 B4GALT4O60513 344 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 GTF2H1P32780 548 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 GNG11P61952 73 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 CLDN10P78369 228 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 CETN1Q12798 172 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 PSMD6Q15008 389 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 MAPK6Q16659 721 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 ZBTB41Q5SVQ8 909 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 PAWRQ96IZ0 340 aaKnown RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 ACO2Q99798 780 aaKnown RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 MSTO1Q9BUK6 570 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 STK33Q9BYT3 514 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 GPR88Q9GZN0 384 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 DEF6Q9H4E7 631 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 TFR2Q9UP52 801 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 F8VZ95 297 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 AKR1B10O60218 316 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 FAM189A1O60320 539 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 TOM1L1O75674 476 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 IPO7O95373 1038 aaKnown RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 EN2P19622 333 aaPredicted RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 RFX1P22670 979 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 PRKCIP41743 596 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 ACOT2P49753 483 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 WNT7BP56706 349 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 ARID5AQ03989 594 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 MBTD1Q05BQ5 628 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 PTPN11Q06124 597 aaPredicted RBP22.12■■□□□ 1.13
ATG4D-204ENST00000586417 POU5F1BQ06416 359 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 KRT39Q6A163 491 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 USP37Q86T82 979 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 SERINC5Q86VE9 423 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 ANKLE1Q8NAG6 615 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 HAUS4Q9H6D7 363 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 TRIM10Q9UDY6 481 aa22.12■■□□□ 1.13
ATG4D-204ENST00000586417 LDHAP00338 332 aaKnown RBP22.11■■□□□ 1.13
ATG4D-204ENST00000586417 KLHL30Q0D2K2 578 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 SLC39A5Q6ZMH5 540 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 IFNLR1Q8IU57 520 aaPredicted RBP22.11■■□□□ 1.13
ATG4D-204ENST00000586417 MYRIPQ8NFW9 859 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 SEMA4DQ92854 862 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 MAP7D2Q96T17 732 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 LACRTQ9GZZ8 138 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 MINDY3Q9H8M7 445 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 CDHR5Q9HBB8 845 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 IFT122Q9HBG6 1241 aa22.11■■□□□ 1.13
ATG4D-204ENST00000586417 ACKR2O00590 384 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 PNMA6AP0CW24 399 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 PROZP22891 400 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 VAV2P52735 878 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 GFPT1Q06210 699 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 DRAP1Q14919 205 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 SPA17Q15506 151 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 C15orf39Q6ZRI6 1047 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 ARHGEF19Q8IW93 802 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 A0A087WZ62 844 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 CLDN3O15551 220 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 KIF5CO60282 957 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 CSDE1O75534 798 aaKnown RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 DLATP10515 647 aaKnown RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 STAT1P42224 750 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 HSP90AA2PQ14568 343 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 KIZQ2M2Z5 673 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 TSHZ1Q6ZSZ6 1077 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 SV2AQ7L0J3 742 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 KIAA1328Q86T90 577 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 ZNF516Q92618 1163 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 DHX38Q92620 1227 aaKnown RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 JAKMIP2Q96AA8 810 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 FDXACB1Q9BRP7 624 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 PTPRHQ9HD43 1115 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 PCDHA13Q9Y5I0 950 aa22.1■■□□□ 1.13
ATG4D-204ENST00000586417 BZW2Q9Y6E2 419 aaKnown RBP22.1■■□□□ 1.13
ATG4D-204ENST00000586417 INO80B-WBP1J3KQ70 363 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 IQCF3P0C7M6 154 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 SOX5P35711 763 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 MATR3P43243 847 aaKnown RBP eCLIP22.09■■□□□ 1.13
ATG4D-204ENST00000586417 GPC3P51654 580 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 PTK2Q05397 1052 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 MCL1Q07820 350 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 TAF2Q6P1X5 1199 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 ZNF571Q7Z3V5 609 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-204ENST00000586417 FAM126BQ8IXS8 530 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 TAS1R2Q8TE23 839 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 IFIH1Q9BYX4 1025 aaKnown RBP22.09■■□□□ 1.13
ATG4D-204ENST00000586417 INO80BQ9C086 356 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-204ENST00000586417 RBAKQ9NYW8 714 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-204ENST00000586417 NOD1Q9Y239 953 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 GINS2Q9Y248 185 aa22.09■■□□□ 1.13
ATG4D-204ENST00000586417 PTPRJQ12913 1337 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 CNTNAP2Q9UHC6 1331 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 B4GALT5O43286 388 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 GPR32O75388 356 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 FERP16591 822 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 PHKA2P46019 1235 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 SLC18A3Q16572 532 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 CCDC122Q5T0U0 273 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 FBXL13Q8NEE6 735 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 FAM84AQ96KN4 292 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms