RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 USP20Q9Y2K6 914 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 RPA1P27694 616 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 ID4P47928 161 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
SDF2-202ENST00000585428 PRPF4BQ13523 1007 aaKnown RBP15.98■□□□□ 0.15
SDF2-202ENST00000585428 RAB33AQ14088 237 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 PSMD5Q16401 504 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 MAPK6Q16659 721 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 PADI6Q6TGC4 694 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 CD300LGQ6UXG3 332 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 FGF13Q92913 245 aa15.98■□□□□ 0.15
SDF2-202ENST00000585428 JAK2O60674 1132 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 RECQL4O94761 1208 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 EDN1P05305 212 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 POU2F2P09086 479 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 SP9P0CG40 484 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 FGFR3P22607 806 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 MCM7P33993 719 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 NAMPTP43490 491 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 PPM1LQ5SGD2 360 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 RTL10Q7L3V2 364 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 MAML2Q8IZL2 1156 aaPredicted RBP15.97■□□□□ 0.15
SDF2-202ENST00000585428 SHDQ96IW2 340 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 DDX23Q9BUQ8 820 aaKnown RBP15.97■□□□□ 0.15
SDF2-202ENST00000585428 R4GN57 208 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 FRYLO94915 3013 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 WDR87Q6ZQQ6 2873 aa15.97■□□□□ 0.15
SDF2-202ENST00000585428 RIF1Q5UIP0 2472 aaKnown RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 TMEM189-UBE2V1I3L0A0 370 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 PRKCBP05771 671 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 C8AP07357 584 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 RFX1P22670 979 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 OR1D2P34982 312 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 SLC44A4Q53GD3 710 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 AXDND1Q5T1B0 1012 aaPredicted RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 EEF1DP3Q658K8 133 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 RSPO2Q6UXX9 243 aaPredicted RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 PJA1Q8NG27 643 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 ITFG1Q8TB96 612 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 PPP1R10Q96QC0 940 aaKnown RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 ADPGKQ9BRR6 497 aa15.96■□□□□ 0.15
SDF2-202ENST00000585428 DNMT3BQ9UBC3 853 aaKnown RBP15.96■□□□□ 0.15
SDF2-202ENST00000585428 CCL16O15467 120 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 XYLBO75191 536 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 LRRN2O75325 713 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 MUTP22033 750 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 SNW1Q13573 536 aaKnown RBP15.95■□□□□ 0.14
SDF2-202ENST00000585428 TRIM29Q14134 588 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 UPP1Q16831 310 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 ALKAL1Q6UXT8 129 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 MTSS1LQ765P7 747 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 FOXQ1Q9C009 403 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 POLD4Q9HCU8 107 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 MTRRQ9UBK8 725 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 KCNH3Q9ULD8 1083 aa15.95■□□□□ 0.14
SDF2-202ENST00000585428 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
SDF2-202ENST00000585428 MTCL1Q9Y4B5 1905 aaKnown RBP15.94■□□□□ 0.14
SDF2-202ENST00000585428 KANSL1LA0AUZ9 987 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 B3GAT3O94766 335 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 CLCNKBP51801 687 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 NEK4P51957 841 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 EFNA5P52803 228 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 PRKCQQ04759 706 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 PPP2R5AQ15172 486 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 ZNF174Q15697 407 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 ECM1Q16610 540 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 XKR4Q5GH76 650 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 POTEHQ6S545 545 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 C4orf32Q8N8J7 132 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 SLC7A14Q8TBB6 771 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 OSBPL6Q9BZF3 934 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 HCFC1R1Q9NWW0 138 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 GDAQ9Y2T3 454 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 BACE2Q9Y5Z0 518 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 ARID2Q68CP9 1835 aa15.94■□□□□ 0.14
SDF2-202ENST00000585428 SMIM28A0A1B0GU29 152 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 ARHGEF35A5YM69 484 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 FOSBP53539 338 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 ORC2Q13416 577 aaPredicted RBP15.93■□□□□ 0.14
SDF2-202ENST00000585428 DCAF4L1Q3SXM0 396 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 ERMNQ8TAM6 284 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 BORCS6Q96GS4 357 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 TNFSF13BQ9Y275 285 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 TDRD15B5MCY1 1934 aaKnown RBP15.93■□□□□ 0.14
SDF2-202ENST00000585428 FAM186AA6NE01 2351 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 DOCK8Q8NF50 2099 aa15.93■□□□□ 0.14
SDF2-202ENST00000585428 DMXL1Q9Y485 3027 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 FAM170BA6NMN3 283 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 K7ERI5 159 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms