RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZNF852Q6ZMS4 543 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 CEP57Q86XR8 500 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 CCDC51Q96ER9 411 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 TTPALQ9BTX7 342 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 SEMA4GQ9NTN9 838 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 RAB23Q9ULC3 237 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 CASTOR2A6NHX0 329 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 INO80B-WBP1J3KQ70 363 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 NPTXRO95502 500 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 P4HBP07237 508 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 IFNAR1P17181 557 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 YWHABP31946 246 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 CREMQ03060 361 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 NAB2Q15742 525 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 CSRP2Q16527 193 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 LIN9Q5TKA1 542 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 IFNLR1Q8IU57 520 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 DDX1Q92499 740 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 KCNMB3Q9NPA1 279 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 DDX25Q9UHL0 483 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 NDRG2Q9UN36 371 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 PCDHA4Q9UN74 947 aa20.11■□□□□ 0.81
TOP3A-220ENST00000585031 MRPS17Q9Y2R5 130 aaKnown RBP20.11■□□□□ 0.81
TOP3A-220ENST00000585031 SF3B1O75533 1304 aaKnown RBP eCLIP20.1■□□□□ 0.818e-6■■■■■ 107
TOP3A-220ENST00000585031 ECI2O75521 394 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 FCARP24071 287 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 HOXC13P31276 330 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 AKAP17AQ02040 695 aaKnown RBP20.1■□□□□ 0.81
TOP3A-220ENST00000585031 DMWDQ09019 674 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 CAPSQ13938 189 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 INF2Q27J81 1249 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 PABPC1LQ4VXU2 614 aaKnown RBP20.1■□□□□ 0.81
TOP3A-220ENST00000585031 PRR23CQ6ZRP0 262 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 C4orf19Q8IY42 314 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 HAS1Q92839 578 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 DYDC2Q96IM9 177 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 LXNQ9BS40 222 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 CHRDQ9H2X0 955 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 SH3GLB2Q9NR46 395 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 PARP2Q9UGN5 583 aa20.1■□□□□ 0.81
TOP3A-220ENST00000585031 TTLL13PA6NNM8 815 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 PTGESO14684 152 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 TM4SF5O14894 197 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 XYLBO75191 536 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 POU2F2P09086 479 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 CEBPBP17676 345 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 OR1D2P34982 312 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 FGD1P98174 961 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 SRSF5Q13243 272 aaKnown RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 CTTNQ14247 550 aaKnown RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 GAS6Q14393 721 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 XKR9Q5GH70 373 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 N4BP2L1Q5TBK1 243 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 TCP11Q8WWU5 503 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 AIFM3Q96NN9 605 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 KCNH3Q9ULD8 1083 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 PPME1Q9Y570 386 aa20.09■□□□□ 0.81
TOP3A-220ENST00000585031 ANKRD11Q6UB99 2663 aaPredicted RBP20.09■□□□□ 0.81
TOP3A-220ENST00000585031 ZFYVE26Q68DK2 2539 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 WDFY3Q8IZQ1 3526 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 A0A1B0GUA9 196 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 HRO43593 1189 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 TUSC3Q13454 348 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 RAB33AQ14088 237 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 GRM2Q14416 872 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 EXOC8Q8IYI6 725 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 BLIDQ8IZY5 108 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 MTRQ99707 1265 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 AGXT2Q9BYV1 514 aa20.08■□□□□ 0.81
TOP3A-220ENST00000585031 TRIM6Q9C030 488 aaPredicted RBP20.08■□□□□ 0.81
TOP3A-220ENST00000585031 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.81
TOP3A-220ENST00000585031 PDCD11Q14690 1871 aaKnown RBP20.07■□□□□ 0.8
TOP3A-220ENST00000585031 RHOP08100 348 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 HOXB3P14651 431 aaPredicted RBP20.07■□□□□ 0.8
TOP3A-220ENST00000585031 GLRA2P23416 452 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 PDIA3P30101 505 aaKnown RBP20.07■□□□□ 0.8
TOP3A-220ENST00000585031 ARL2P36404 184 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 SATB1Q01826 763 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 CYP4A11Q02928 519 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 POU5F1BQ06416 359 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 SPIRE1Q08AE8 756 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 PCBP1Q15365 356 aaKnown RBP eCLIP20.07■□□□□ 0.8
TOP3A-220ENST00000585031 EPHA7Q15375 998 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 UVSSAQ2YD98 709 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 SLC27A1Q6PCB7 646 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 CD300LGQ6UXG3 332 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 PRR23BQ6ZRT6 265 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 KCNB2Q92953 911 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 TCEAL4Q96EI5 215 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 IER2Q9BTL4 223 aa20.07■□□□□ 0.8
TOP3A-220ENST00000585031 MRPS23Q9Y3D9 190 aaKnown RBP20.07■□□□□ 0.8
TOP3A-220ENST00000585031 A0A087WWV3 80 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 FOXD2O60548 495 aaPredicted RBP20.06■□□□□ 0.8
TOP3A-220ENST00000585031 PROS1P07225 676 aa20.06■□□□□ 0.8
TOP3A-220ENST00000585031 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
TOP3A-220ENST00000585031 KRT32Q14532 448 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms