RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CLASP2O75122 1294 aaKnown RBP29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 GLP2RO95838 553 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 GLUD2P49448 558 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 XKR4Q5GH76 650 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 FUT10Q6P4F1 479 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 ZNF720Q7Z2F6 126 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 CCDC65Q8IXS2 484 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 DHX58Q96C10 678 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 SNX27Q96L92 541 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 PPP1R10Q96QC0 940 aaKnown RBP29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 OLFML3Q9NRN5 406 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 EXOC7Q9UPT5 735 aa29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 SF3B1O75533 1304 aaKnown RBP eCLIP29.69■■■□□ 2.34
SMARCD2-210ENST00000584400 SMIM28A0A1B0GU29 152 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 HOXB8P17481 243 aaPredicted RBP29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 ELAVL2Q12926 359 aaKnown RBP29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 ALCAMQ13740 583 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 KCNC3Q14003 757 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 CLUL1Q15846 466 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 E2F4Q16254 413 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 USP41Q3LFD5 358 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 HERC4Q5GLZ8 1057 aaPredicted RBP29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 GLRA4Q5JXX5 417 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 SLFN12LQ6IEE8 588 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 ALKAL1Q6UXT8 129 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 GPR65Q8IYL9 337 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 RNF168Q8IYW5 571 aaPredicted RBP29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 AUTS2Q8WXX7 1259 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 PLEKHA5Q9HAU0 1116 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 ZDHHC9Q9Y397 364 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 PCDHB13Q9Y5F0 798 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 HCFC2Q9Y5Z7 792 aa29.68■■■□□ 2.34
SMARCD2-210ENST00000584400 MYH15Q9Y2K3 1946 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 TNFRSF10AO00220 468 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 MBTPS2O43462 519 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 CLTAP09496 248 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 IL9P15248 144 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 KCNE1P15382 129 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 NAB2Q15742 525 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 RESP18Q5W5W9 173 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 LLGL2Q6P1M3 1020 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 DDX27Q96GQ7 796 aaKnown RBP29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 SPATA32Q96LK8 384 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 PANK4Q9NVE7 773 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 KBTBD4Q9NVX7 518 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 CNTN3Q9P232 1028 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 PRKAG3Q9UGI9 489 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 ATG2AQ2TAZ0 1938 aa29.67■■■□□ 2.34
SMARCD2-210ENST00000584400 FRMD3A2A2Y4 597 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 EFEMP2O95967 443 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 DSG1Q02413 1049 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 CREMQ03060 361 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 SMAD2Q15796 467 aaKnown RBP29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 ANKRD54Q6NXT1 300 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 DCLRE1AQ6PJP8 1040 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 STXBP4Q6ZWJ1 553 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 SMRP1Q8NCR6 262 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 VN1R2Q8NFZ6 395 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 SCAND2PQ9GZW5 306 aaPredicted RBP29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 CHST7Q9NS84 486 aa29.66■■■□□ 2.34
SMARCD2-210ENST00000584400 OGTO15294 1046 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 POLR2DO15514 142 aaKnown RBP29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 LILRB3O75022 631 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 KLRC2P26717 231 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 TPRNQ4KMQ1 711 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 ZC2HC1CQ53FD0 456 aaPredicted RBP29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 KLHL5Q96PQ7 755 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 PAAF1Q9BRP4 392 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 MSTO1Q9BUK6 570 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 CXCL16Q9H2A7 254 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 DZANK1Q9NVP4 752 aa29.65■■■□□ 2.34
SMARCD2-210ENST00000584400 F8W810 466 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 TMEM189-UBE2V1I3L0A0 370 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 C2CD2LO14523 706 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 KIF4AO95239 1232 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 GCNT3O95395 438 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 ADH1AP07327 375 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 NUCB2P80303 420 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 KIAA0319Q5VV43 1072 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 ELMSAN1Q6PJG2 1045 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 LEO1Q8WVC0 666 aaPredicted RBP29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 RABGGTAQ92696 567 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 ACCSQ96QU6 501 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 TSPAN18Q96SJ8 248 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 GPR62Q9BZJ7 368 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 DPP7Q9UHL4 492 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 KCNH3Q9ULD8 1083 aa29.64■■■□□ 2.34
SMARCD2-210ENST00000584400 REV3LO60673 3130 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 MYH11P35749 1972 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 A0A0B4J269 797 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 TRAPPC3O43617 180 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 B3GAT3O94766 335 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 CNPP09543 421 aaKnown RBP29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 RBM10P98175 930 aaKnown RBP29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 PPP2R3AQ06190 1150 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 POSTNQ15063 836 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 SLC10A6Q3KNW5 377 aa29.63■■■□□ 2.33
SMARCD2-210ENST00000584400 ADALQ6DHV7 355 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms