RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CDKL5O76039 1030 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 CFIP05156 583 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 EGR2P11161 476 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 ALOX15P16050 662 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 C21orf58P58505 322 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 SCAPQ12770 1279 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 MED25Q71SY5 747 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 STRA8Q7Z7C7 330 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 THNSL2Q86YJ6 484 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 OR7D4Q8NG98 312 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 TTC1Q99614 292 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 ZSWIM1Q9BR11 485 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 KLHL11Q9NVR0 708 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 RNF181Q9P0P0 153 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 ATP11BQ9Y2G3 1177 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 SPATA31A6Q5VVP1 1343 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 ENPP3O14638 875 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 ULK1O75385 1050 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 SNRPA1P09661 255 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 LMO1P25800 156 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 CXCR5P32302 372 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 ADRM1Q16186 407 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 PRR16Q569H4 304 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 AFMIDQ63HM1 303 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 SYCE2Q6PIF2 218 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 MAPKAPK5Q8IW41 473 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 GPR156Q8NFN8 814 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 UHRF1Q96T88 793 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 PCGF6Q9BYE7 350 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 VTA1Q9NP79 307 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 DMRT3Q9NQL9 472 aa5.71□□□□□ -1.5
SMCHD1-208ENST00000583344 CCDC78A2IDD5 438 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 ZEB2O60315 1214 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 ECHS1P30084 290 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 SREBF1P36956 1147 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 GYS2P54840 703 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 B3GNTL1Q67FW5 361 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 FBXO42Q6P3S6 717 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 DDX46Q7L014 1031 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 GPR149Q86SP6 731 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 STON2Q8WXE9 905 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 LDAHQ9H6V9 325 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 RSAD1Q9HA92 442 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 BCO1Q9HAY6 547 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 APOBEC2Q9Y235 224 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 SALL3Q9BXA9 1300 aa5.7□□□□□ -1.5
SMCHD1-208ENST00000583344 GOLGA8AA7E2F4 631 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 ESRRBO95718 433 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 FOSP01100 380 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 RAP2AP10114 183 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MPLP40238 635 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MRPS9P82933 396 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MXRA7P84157 204 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 OCA2Q04671 838 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 HNRNPA0Q13151 305 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MPP3Q13368 585 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MUM1Q2TAK8 710 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 RRP12Q5JTH9 1297 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 PQLC1Q8N2U9 271 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 TMEM132CQ8N3T6 1108 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 SIMC1Q8NDZ2 872 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 MRI1Q9BV20 369 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 ALOXE3Q9BYJ1 711 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 IFT122Q9HBG6 1241 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 ALG13Q9NP73 1137 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 ADARB2Q9NS39 739 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 SCOCQ9UIL1 159 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 INSL6Q9Y581 213 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 COX11Q9Y6N1 276 aa5.69□□□□□ -1.5
SMCHD1-208ENST00000583344 A0A1B0GTW7 788 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 FPR1P21462 350 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 FDXRP22570 491 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 SLC6A2P23975 617 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 ALDH1A3P47895 512 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 PER3P56645 1201 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 SCAND1P57086 179 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 BLOC1S1P78537 153 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 PPP3CAQ08209 521 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 SP140Q13342 867 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 ERCC6LQ2NKX8 1250 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 TOR2AQ5JU69 321 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 COLEC12Q5KU26 742 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 LMBR1Q8WVP7 490 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 HOXB13Q92826 284 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 RNF31Q96EP0 1072 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 Q96MF0 132 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 SIK3Q9Y2K2 1263 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 TBX22Q9Y458 520 aa5.68□□□□□ -1.5
SMCHD1-208ENST00000583344 AATKQ6ZMQ8 1374 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 PRSS23O95084 383 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 ATP5JP18859 108 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 FGFR4P22455 802 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms