RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 POLIQ9UNA4 740 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 USP20Q9Y2K6 914 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 MTF2Q9Y483 593 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-221ENST00000583080 NOTCH4Q99466 2003 aa17.89■□□□□ 0.45
SREBF1-221ENST00000583080 FRYLO94915 3013 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 RECQL4O94761 1208 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 EDN1P05305 212 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 HNRNPA1P09651 372 aaKnown RBP eCLIP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 IGFBP6P24592 240 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 MLF2Q15773 248 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 CDCA2Q69YH5 1023 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 SUMF1Q8NBK3 374 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 SLC7A14Q8TBB6 771 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 BSNDQ8WZ55 320 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 RUBCNQ92622 972 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 DDX23Q9BUQ8 820 aaKnown RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 PRMT7Q9NVM4 692 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-221ENST00000583080 HCFC1R1Q9NWW0 138 aa17.88■□□□□ 0.45
SREBF1-221ENST00000583080 KANSL1LA0AUZ9 987 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 FDPSP14324 419 aaKnown RBP17.87■□□□□ 0.45
SREBF1-221ENST00000583080 HOXA9P31269 272 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 TXKP42681 527 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 ING5Q8WYH8 240 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 SHDQ96IW2 340 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 PRIMPOLQ96LW4 560 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 FZD8Q9H461 694 aa17.87■□□□□ 0.45
SREBF1-221ENST00000583080 NEMFO60524 1076 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 CD72P21854 359 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 FOSBP53539 338 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 UBXN2BQ14CS0 331 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 EEF1DP3Q658K8 133 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 MTSS1LQ765P7 747 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 NOSTRINQ8IVI9 506 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 NPAS3Q8IXF0 933 aa17.86■□□□□ 0.45
SREBF1-221ENST00000583080 SPATA6Q9NWH7 488 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-221ENST00000583080 N4BP3O15049 544 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 XYLBO75191 536 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 THP07101 528 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 FAM187BQ17R55 369 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 SLC44A4Q53GD3 710 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 GLRA4Q5JXX5 417 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 AXDND1Q5T1B0 1012 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-221ENST00000583080 RSPO2Q6UXX9 243 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-221ENST00000583080 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-221ENST00000583080 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 MTMR9Q96QG7 549 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 BCO2Q9BYV7 579 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 TMEM60Q9H2L4 133 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 LTB4R2Q9NPC1 389 aa17.85■□□□□ 0.45
SREBF1-221ENST00000583080 DNMT3BQ9UBC3 853 aaKnown RBP17.85■□□□□ 0.45
SREBF1-221ENST00000583080 BTBD18B2RXH4 712 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 KINO60870 393 aaKnown RBP17.84■□□□□ 0.45
SREBF1-221ENST00000583080 MED24O75448 989 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 LARGE1O95461 756 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 PRKCBP05771 671 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 POU2F2P09086 479 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 LIG1P18858 919 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 OR1D2P34982 312 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 PRKCQQ04759 706 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 ELAVL2Q12926 359 aaKnown RBP17.84■□□□□ 0.45
SREBF1-221ENST00000583080 PRPF4BQ13523 1007 aaKnown RBP17.84■□□□□ 0.45
SREBF1-221ENST00000583080 RAB33AQ14088 237 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 PUM1Q14671 1186 aaKnown RBP eCLIP17.84■□□□□ 0.45
SREBF1-221ENST00000583080 TMEM132AQ24JP5 1023 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 PABPC1LQ4VXU2 614 aaKnown RBP17.84■□□□□ 0.45
SREBF1-221ENST00000583080 POTEHQ6S545 545 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 MCPH1Q8NEM0 835 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 BRMS1Q9HCU9 246 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 DLL3Q9NYJ7 618 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 MTRRQ9UBK8 725 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 GDAQ9Y2T3 454 aa17.84■□□□□ 0.45
SREBF1-221ENST00000583080 FAM170BA6NMN3 283 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 LAMTOR5O43504 91 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 ATP2B1P20020 1258 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 FGFR3P22607 806 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 TARSP26639 723 aaKnown RBP17.83■□□□□ 0.44
SREBF1-221ENST00000583080 SLC5A9Q2M3M2 681 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 ZNF528Q3MIS6 628 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 CD300LGQ6UXG3 332 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 DIS3L2Q8IYB7 885 aaKnown RBP17.83■□□□□ 0.44
SREBF1-221ENST00000583080 C3orf58Q8NDZ4 430 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 WASF1Q92558 559 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 KIFC3Q9BVG8 833 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 PLA2G2FQ9BZM2 168 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 FBXO4Q9UKT5 387 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 CDY1Q9Y6F8 540 aa17.83■□□□□ 0.44
SREBF1-221ENST00000583080 I3L4J1 428 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.44
SREBF1-221ENST00000583080 TKTP29401 623 aaKnown RBP17.82■□□□□ 0.44
SREBF1-221ENST00000583080 CSTF1Q05048 431 aaKnown RBP17.82■□□□□ 0.44
SREBF1-221ENST00000583080 MAPK6Q16659 721 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 RSPO4Q2I0M5 234 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-221ENST00000583080 PDXDC1Q6P996 788 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 TPRG1Q6ZUI0 275 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms