RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 PES1O00541 588 aaKnown RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 HOXA2O43364 376 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ZNF623O75123 536 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 CLSTN1O94985 981 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 UPP2O95045 317 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ATF7P17544 494 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MLH1P40692 756 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MAGEA10P43363 369 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 EPHB4P54760 987 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 WDR5P61964 334 aaKnown RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PSMD6Q15008 389 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 SURF1Q15526 300 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TCP11X2Q5H9J9 407 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MRPL10Q7Z7H8 261 aaKnown RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 RTN4RL1Q86UN2 441 aaPredicted RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 NPAS4Q8IUM7 802 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ABI1Q8IZP0 508 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 URGCPQ8TCY9 931 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 VWCEQ96DN2 955 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MFSD14AQ96MC6 490 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 CGRRF1Q99675 332 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ELAC1Q9H777 363 aaKnown RBP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MMRN2Q9H8L6 949 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PDE11AQ9HCR9 933 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 UBN1Q9NPG3 1134 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TAB2Q9NYJ8 693 aa9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TET1Q8NFU7 2136 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TTC26A0AVF1 554 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MEIS3P2A8K0S8 358 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 LACTBL1A8MY62 500 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 STX10O60499 249 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 EOMESO95936 686 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 SERPINC1P01008 464 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TNNC2P02585 160 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 NFICP08651 508 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TMEM191BP0C7N4 346 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 FGFR1P11362 822 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ATP1A3P13637 1013 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ZNF18P17022 549 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TNNI1P19237 187 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 VAMP7P51809 220 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 DEFB103AP81534 67 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TFAMQ00059 246 aaKnown RBP9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 POU5F1Q01860 360 aaKnown RBP9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TMEM132DQ14C87 1099 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 KRT31Q15323 416 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MAN2A1Q16706 1144 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 SLC10A6Q3KNW5 377 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 GLRA4Q5JXX5 417 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TMEM240Q5SV17 173 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 LMBRD2Q68DH5 695 aaPredicted RBP9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 FAM117BQ6P1L5 589 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 AGMOQ6ZNB7 445 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 C16orf59Q7L2K0 433 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 IRF2BP1Q8IU81 584 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 WDR49Q8IV35 697 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TRIM59Q8IWR1 403 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 CD302Q8IX05 232 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 HELQQ8TDG4 1101 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 KIF12Q96FN5 646 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ZFP42Q96MM3 310 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 GAD1Q99259 594 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 GIT1Q9Y2X7 761 aa9.86□□□□□ -0.83
PDLIM1P2-201ENST00000582923 BRCA2P51587 3418 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 CITO14578 2027 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ANK1P16157 1881 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 GOLGA6L3A6NEY3 463 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ARL5CA6NH57 179 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 LRRIQ3A6PVS8 624 aaPredicted RBP9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 H0YGN5 161 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 XPOTO43592 962 aaKnown RBP9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 AFPP02771 609 aaKnown RBP9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MXI1P50539 228 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 SCNN1GP51170 649 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MARSP56192 900 aaKnown RBP9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 WNT7BP56706 349 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 DLG4P78352 724 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 FAM189BP81408 668 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 MYL7Q01449 175 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 BIRC3Q13489 604 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 FILIP1LQ4L180 1135 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 CLLU1OSQ5K130 101 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PLEKHO2Q8TD55 490 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 PARD3BQ8TEW8 1205 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 HERVK_113Q902F9 699 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 SLC35C1Q96A29 364 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 ANKRD36BP1Q96IX9 119 aa9.85□□□□□ -0.83
PDLIM1P2-201ENST00000582923 FAM84AQ96KN4 292 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms