RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 ABCB11O95342 1321 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 SOWAHDA6NJG2 315 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 LAD1O00515 517 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 DCXO43602 365 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 NDUFB5O43674 189 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
SS18-221ENST00000582448 PFKFB1P16118 471 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 SYKP43405 635 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 RBL2Q08999 1139 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 ZNF174Q15697 407 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 TRIM71Q2Q1W2 868 aaKnown RBP11.42□□□□□ -0.58
SS18-221ENST00000582448 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
SS18-221ENST00000582448 RESP18Q5W5W9 173 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
SS18-221ENST00000582448 PCDHA1Q9Y5I3 950 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 BDP1A6H8Y1 2624 aa11.42□□□□□ -0.58
SS18-221ENST00000582448 HAS3O00219 553 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 CTSHP09668 335 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 MCM7P33993 719 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 NDUFA8P51970 172 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 ORC1Q13415 861 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 NPY5RQ15761 445 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 CLUL1Q15846 466 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 ARL6IP4Q66PJ3 421 aaKnown RBP11.41□□□□□ -0.58
SS18-221ENST00000582448 Q6ZS46 218 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 VN1R5Q7Z5H4 357 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 GAS2L3Q86XJ1 694 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 KLHL23Q8NBE8 558 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 NEK9Q8TD19 979 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 UBASH3BQ8TF42 649 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 BHLHE41Q9C0J9 482 aaPredicted RBP11.41□□□□□ -0.58
SS18-221ENST00000582448 PSTPIP2Q9H939 334 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
SS18-221ENST00000582448 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
SS18-221ENST00000582448 TANC1Q9C0D5 1861 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 METTL12A8MUP2 240 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 H3BNC9 293 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 ZNF202O95125 648 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 GGPS1O95749 300 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 F2P00734 622 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 HTRA4P83105 476 aaPredicted RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 NHLH1Q02575 133 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 INF2Q27J81 1249 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 PRSS36Q5K4E3 855 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 GALNT12Q8IXK2 581 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 BSNDQ8WZ55 320 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 SEPT8Q92599 483 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 OSBPL7Q9BZF2 842 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
SS18-221ENST00000582448 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 FAM50BQ9Y247 325 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 PTPRSQ13332 1948 aa11.4□□□□□ -0.58
SS18-221ENST00000582448 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 FAM237AA0A1B0GTK4 181 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 GPR182O15218 404 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 TREHO43280 583 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
SS18-221ENST00000582448 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 STX1AQ16623 288 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 PLEKHG4Q58EX7 1191 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms