RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PCYT2Q99447 389 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 BCO2Q9BYV7 579 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NUP62CLQ9H1M0 184 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLC2A4RGQ9NR83 387 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KBTBD4Q9NVX7 518 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZSCAN32Q9NX65 697 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DACT1Q9NYF0 836 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ODF2LQ9ULJ1 636 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIAA1024Q9UPX6 916 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 WDFY3Q8IZQ1 3526 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MYH11P35749 1972 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GREB1Q4ZG55 1949 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CLUHO75153 1309 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PVALEFA0A1B0GWK0 134 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 H0YCG3 227 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DDX39AO00148 427 aaKnown RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MAGEB2O15479 319 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DGAT1O75907 488 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIF20AO95235 890 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CCNE2O96020 404 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 OATP04181 439 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SPATA31C1P0DKV0 1188 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PLCG1P19174 1290 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CLCN4P51793 760 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PSMD2Q13200 908 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 E2F4Q16254 413 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZNF484Q5JVG2 852 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SWSAP1Q6NVH7 229 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DDX53Q86TM3 631 aaKnown RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TCP11Q8WWU5 503 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 AUTS2Q8WXX7 1259 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DDX1Q92499 740 aaKnown RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RAD54LQ92698 747 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NELL1Q92832 810 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DHX58Q96C10 678 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 OSMRQ99650 979 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 EMILIN2Q9BXX0 1053 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FOXQ1Q9C009 403 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 WDR6Q9NNW5 1121 aaKnown RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PARD6AQ9NPB6 346 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SPATA6Q9NWH7 488 aaPredicted RBP9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PKD2L1Q9P0L9 805 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GABBR1Q9UBS5 961 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SEL1LQ9UBV2 794 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZFYVE26Q68DK2 2539 aa9.62□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KANSL1LA0AUZ9 987 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ARHGEF35A5YM69 484 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NT5C1B-RDH14C9J2C7 533 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 EML1O00423 815 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LRP3O75074 770 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NR1I2O75469 434 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZSCAN20P17040 1043 aaPredicted RBP9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GAP43P17677 238 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KLRC1P26715 233 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TMOD1P28289 359 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PMLP29590 882 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DNM2P50570 870 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SHC2P98077 582 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 HSP90AA2PQ14568 343 aaPredicted RBP9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KARSQ15046 597 aaKnown RBP9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 POSTNQ15063 836 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ECHDC2Q86YB7 292 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIAA0319LQ8IZA0 1049 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 IGSF21Q96ID5 467 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 C7orf25Q9BPX7 421 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FAM126AQ9BYI3 521 aaPredicted RBP9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 OSBPL6Q9BZF3 934 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CLSTN2Q9H4D0 955 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DPP7Q9UHL4 492 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DACH1Q9UI36 760 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 COL4A3Q01955 1670 aa9.61□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZZEF1O43149 2961 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ASAP2O43150 1006 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LRRN2O75325 713 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MED24O75448 989 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KRT18P05783 430 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PLA2G4BP0C869 781 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MAPTP10636 758 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KLRC2P26717 231 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RARRES1P49788 294 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PRKCEQ02156 737 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CYP4A11Q02928 519 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms