RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FAM212AQ96EL1 285 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 PDE11AQ9HCR9 933 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 RNF19AQ9NV58 838 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 PARP2Q9UGN5 583 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 LAMA2P24043 3122 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 LRRC10BA6NIK2 292 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 IL18RAPO95256 599 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 FGBP02675 491 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 ACTN1P12814 892 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 KRT13P13646 458 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 CDK11BP21127 795 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 EEF1GP26641 437 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 MAGEA10P43363 369 aaPredicted RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 MTIF2P46199 727 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 VAMP7P51809 220 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 AFF1P51825 1210 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 DLG4P78352 724 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 SPAG1Q07617 926 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 BFSP1Q12934 665 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 KRT31Q15323 416 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 INTS8Q75QN2 995 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 OTOP2Q7RTS6 562 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 HACE1Q8IYU2 909 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 GSTCDQ8NEC7 633 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 ZNF516Q92618 1163 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 PGBD4Q96DM1 585 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 FAM84AQ96KN4 292 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 SNX27Q96L92 541 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 ZMAT2Q96NC0 199 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 GAD1Q99259 594 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.35□□□□□ -0.756e-15■□□□□ 10.6
RFFL-210ENST00000582308 TUBGCP2Q9BSJ2 902 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 ELAC1Q9H777 363 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 PLEKHA5Q9HAU0 1116 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 TOPORSQ9NS56 1045 aaPredicted RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 TMEM161AQ9NX61 479 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 MIOSQ9NXC5 875 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 TAB2Q9NYJ8 693 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 LIMA1Q9UHB6 759 aaKnown RBP10.35□□□□□ -0.75
RFFL-210ENST00000582308 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 GBF1Q92538 1859 aa10.35□□□□□ -0.75
RFFL-210ENST00000582308 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PTPRJQ12913 1337 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 FSD2A1L4K1 749 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 ARL5CA6NH57 179 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 LRRIQ3A6PVS8 624 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 AP5Z1O43299 807 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 EFCAB14O75071 495 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 OFD1O75665 1012 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 BAIAP3O94812 1187 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 NFICP08651 508 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 DLATP10515 647 aaKnown RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 FGFR1P11362 822 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 MLH1P40692 756 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 COPB1P53618 953 aaKnown RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 YARSP54577 528 aaKnown RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 TPM4P67936 248 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 CLDN10P78369 228 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 DEFB103AP81534 67 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PPP2R3AQ06190 1150 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 ENPEPQ07075 957 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 SURF1Q15526 300 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 ZBTB6Q15916 424 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 MIIPQ5JXC2 388 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 CLLU1OSQ5K130 101 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 LMBRD2Q68DH5 695 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 JADE1Q6IE81 842 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PSRC1Q6PGN9 363 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 NPAS4Q8IUM7 802 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 EFCAB13Q8IY85 973 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 TMEM130Q8N3G9 435 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 HERVK_113Q902F9 699 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 SLC35C1Q96A29 364 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 ASB7Q9H672 318 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 RSAD1Q9HA92 442 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
RFFL-210ENST00000582308 CNTN3Q9P232 1028 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PLAGL2Q9UPG8 496 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 PCDHB7Q9Y5E2 793 aa10.34□□□□□ -0.75
RFFL-210ENST00000582308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
RFFL-210ENST00000582308 SMIM28A0A1B0GU29 152 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 H0YGN5 161 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 PTGESO14684 152 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 INPPL1O15357 1258 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 CAPN15O75808 1086 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 UPP2O95045 317 aa10.33□□□□□ -0.76
RFFL-210ENST00000582308 KCNE1P15382 129 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms