RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CWH43Q9H720 699 aa21.82■■□□□ 1.08
TOP3A-213ENST00000582230 MIOSQ9NXC5 875 aa21.82■■□□□ 1.08
TOP3A-213ENST00000582230 SMIM28A0A1B0GU29 152 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 PTGESO14684 152 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 ARHGEF15O94989 841 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 LINC00271P0C7V0 271 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 BMPR1AP36894 532 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 CYP2J2P51589 502 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 SKOR2Q2VWA4 1001 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-213ENST00000582230 CENPPQ6IPU0 288 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 FBXL18Q96ME1 805 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 TSG101Q99816 390 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 PLVAPQ9BX97 442 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 ZNF576Q9H609 170 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 ASB7Q9H672 318 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 NRDE2Q9H7Z3 1164 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 SLC38A7Q9NVC3 462 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 DMAC2Q9NW81 257 aa21.81■■□□□ 1.08
TOP3A-213ENST00000582230 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-213ENST00000582230 ZNF233A6NK53 670 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 LACTBL1A8MY62 500 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 PPP1R3GB7ZBB8 358 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 IL18RAPO95256 599 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 NR3C1P04150 777 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 RB1P06400 928 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 RPL13P26373 211 aaKnown RBP21.8■■□□□ 1.08
TOP3A-213ENST00000582230 ALDH7A1P49419 539 aaKnown RBP21.8■■□□□ 1.08
TOP3A-213ENST00000582230 DSC1Q08554 894 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 EDRF1Q3B7T1 1238 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 ZCWPW2Q504Y3 356 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 ZNF697Q5TEC3 545 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 ZNF280BQ86YH2 543 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 MLKLQ8NB16 471 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 ZNF558Q96NG5 402 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 PPP1R10Q96QC0 940 aaKnown RBP21.8■■□□□ 1.08
TOP3A-213ENST00000582230 TMEM175Q9BSA9 504 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 PCDHB12Q9Y5F1 795 aa21.8■■□□□ 1.08
TOP3A-213ENST00000582230 GOLGA8IPA6NC78 632 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 GOLGA8JA6NMD2 632 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 C5orf67F2Z3F1 127 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 MEFVO15553 781 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 EXOC3O60645 756 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 ZC3H11AO75152 810 aaKnown RBP eCLIP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 DDHD2O94830 711 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 ALDH2P05091 517 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 CD44P16070 742 aaKnown RBP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 CCNE1P24864 410 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 LRRC63Q05C16 580 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 SNRNP35Q16560 246 aaKnown RBP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 EPC2Q52LR7 807 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 BRSK2Q8IWQ3 736 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 COLGALT2Q8IYK4 626 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 ZSWIM2Q8NEG5 633 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 NOC3LQ8WTT2 800 aaKnown RBP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 P2RX5Q93086 422 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 FAM212AQ96EL1 285 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 C17orf80Q9BSJ5 609 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 CXCL16Q9H2A7 254 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 RBAKQ9NYW8 714 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-213ENST00000582230 TMEM63CQ9P1W3 806 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 HCSTQ9UBK5 93 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 PLAGL2Q9UPG8 496 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 DERAQ9Y315 318 aa21.79■■□□□ 1.08
TOP3A-213ENST00000582230 BICDL2A1A5D9 508 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 CTNNB1P35222 781 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 FXR1P51114 621 aaKnown RBP eCLIP21.78■■□□□ 1.08
TOP3A-213ENST00000582230 BCAR1P56945 870 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 NLRP12P59046 1061 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 TUSC3Q13454 348 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 SURF1Q15526 300 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 GLRA4Q5JXX5 417 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 CAVIN1Q6NZI2 390 aaKnown RBP21.78■■□□□ 1.08
TOP3A-213ENST00000582230 FOXR2Q6PJQ5 311 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 KCNT2Q6UVM3 1135 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 COLGALT1Q8NBJ5 622 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 ZMAT2Q96NC0 199 aaKnown RBP21.78■■□□□ 1.08
TOP3A-213ENST00000582230 TRIOBPQ9H2D6 2365 aa21.78■■□□□ 1.08
TOP3A-213ENST00000582230 XPOTO43592 962 aaKnown RBP21.77■■□□□ 1.08
TOP3A-213ENST00000582230 GALTP07902 379 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 NR2F2P24468 414 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 PPM1AP35813 382 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 ADAM9Q13443 819 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 NAB2Q15742 525 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 KLHL10Q6JEL2 608 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 NT5DC4Q86YG4 428 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 FBXO22Q8NEZ5 403 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 KIF12Q96FN5 646 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 C11orf84Q9BUA3 381 aaPredicted RBP21.77■■□□□ 1.08
TOP3A-213ENST00000582230 SPG21Q9NZD8 308 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 DNAJB4Q9UDY4 337 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 DACH1Q9UI36 760 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 MTUS1Q9ULD2 1270 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 FRMD4BQ9Y2L6 1034 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 FAN1Q9Y2M0 1017 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 C2CD2Q9Y426 696 aa21.77■■□□□ 1.08
TOP3A-213ENST00000582230 FNDC1Q4ZHG4 1894 aaPredicted RBP21.77■■□□□ 1.08
TOP3A-213ENST00000582230 FKBP3Q00688 224 aaKnown RBP21.76■■□□□ 1.07
TOP3A-213ENST00000582230 PAK1Q13153 545 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms