RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 RSPH3Q86UC2 560 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 TOP1MTQ969P6 601 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 BORCS6Q96GS4 357 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 NLRP4Q96MN2 994 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
SRSF1-204ENST00000581979 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
SRSF1-204ENST00000581979 C2orf40Q9H1Z8 148 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 TTC26A0AVF1 554 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 GOLGA8IPA6NC78 632 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 GOLGA8JA6NMD2 632 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 GARTP22102 1010 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 KRT9P35527 623 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 EFNA5P52803 228 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 BFSP1Q12934 665 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 SLC39A4Q6P5W5 647 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 SAAL1Q96ER3 474 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 FAM207AQ9NSI2 230 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 ABHD10Q9NUJ1 306 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 CAPN11Q9UMQ6 739 aa13.66□□□□□ -0.22
SRSF1-204ENST00000581979 LUC7L2Q9Y383 392 aaKnown RBP13.66□□□□□ -0.22
SRSF1-204ENST00000581979 MAPK13O15264 365 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 ADSSP30520 456 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRSF1-204ENST00000581979 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 CDCA2Q69YH5 1023 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-204ENST00000581979 FAM117BQ6P1L5 589 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-204ENST00000581979 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 CRACR2AQ9BSW2 395 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
SRSF1-204ENST00000581979 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-204ENST00000581979 LMCD1Q9NZU5 365 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 AKT3Q9Y243 479 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
SRSF1-204ENST00000581979 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 STX10O60499 249 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 PIGRP01833 764 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 PRKCBP05771 671 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 VAMP7P51809 220 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 LPIN1Q14693 890 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MAPK6Q16659 721 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TSR1Q2NL82 804 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 GPD1LQ8N335 351 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MICALL1Q8N3F8 863 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 LINC01465Q8N7H1 131 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 USP20Q9Y2K6 914 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 COL4A4P53420 1690 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 XIRP2A4UGR9 3374 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 GHRP10912 638 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MRPS6P82932 125 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 ZBED6P86452 979 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 SLFN12LQ6IEE8 588 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 GBP6Q6ZN66 633 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TMEM139Q8IV31 216 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 OR8K1Q8NGG5 319 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 MRPL4Q9BYD3 311 aaKnown RBP13.64□□□□□ -0.23
SRSF1-204ENST00000581979 CCDC113Q9H0I3 377 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 AGPAT5Q9NUQ2 364 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 CDY2AQ9Y6F7 541 aa13.64□□□□□ -0.23
SRSF1-204ENST00000581979 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
SRSF1-204ENST00000581979 ARHGAP6O43182 974 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 PHKA2P46019 1235 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 FMO5P49326 533 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
SRSF1-204ENST00000581979 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.234e-11■□□□□ 10.2
SRSF1-204ENST00000581979 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms