RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MAP7D2Q96T17 732 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 CARD6Q9BX69 1037 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 FZD8Q9H461 694 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 PDE11AQ9HCR9 933 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 PRMT7Q9NVM4 692 aaPredicted RBP15.8■□□□□ 0.12
MKS1-211ENST00000581761 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
MKS1-211ENST00000581761 A6NJR5 290 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 FOXN3O00409 490 aaPredicted RBP15.79■□□□□ 0.12
MKS1-211ENST00000581761 OGTO15294 1046 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 MOCS3O95396 460 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 HLA-DRAP01903 254 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 PRKAR2AP13861 404 aaKnown RBP15.79■□□□□ 0.12
MKS1-211ENST00000581761 MFAP3P55082 362 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 WNT7BP56706 349 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 CLDN10P78369 228 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 POU5F1BQ06416 359 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 MCL1Q07820 350 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 BIRC3Q13489 604 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 BMS1Q14692 1282 aaKnown RBP15.79■□□□□ 0.12
MKS1-211ENST00000581761 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 MPZL3Q6UWV2 235 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 C15orf39Q6ZRI6 1047 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 TSHZ1Q6ZSZ6 1077 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 PPM1KQ8N3J5 372 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 TRPV1Q8NER1 839 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 U2AF1L4Q8WU68 220 aaKnown RBP15.79■□□□□ 0.12
MKS1-211ENST00000581761 ZNF516Q92618 1163 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 KAT5Q92993 513 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 LENG1Q96BZ8 264 aaPredicted RBP15.79■□□□□ 0.12
MKS1-211ENST00000581761 FAM84AQ96KN4 292 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 PPP1R16BQ96T49 567 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 NFKBIZQ9BYH8 718 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 AP5M1Q9H0R1 490 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 CDC23Q9UJX2 597 aa15.79■□□□□ 0.12
MKS1-211ENST00000581761 CNTNAP2Q9UHC6 1331 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 A0A087WZ62 844 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 DDX3XO00571 662 aaKnown RBP eCLIP15.78■□□□□ 0.126e-6■□□□□ 8.9
MKS1-211ENST00000581761 ABLIM1O14639 778 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 ZEB2O60315 1214 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 ZC3H11AO75152 810 aaKnown RBP eCLIP15.78■□□□□ 0.12
MKS1-211ENST00000581761 C4BPAP04003 597 aaKnown RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 VTNP04004 478 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 MYL3P08590 195 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 TNFAIP3P21580 790 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 CCND3P30281 292 aaPredicted RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 USP8P40818 1118 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 PIK3CAP42336 1068 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 NAP1L1P55209 391 aaKnown RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 CHMP4BP1P59074 171 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 NAB2Q15742 525 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 ZNF568Q3ZCX4 644 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 ALKBH5Q6P6C2 394 aaKnown RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 TRIM58Q8NG06 486 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 HELQQ8TDG4 1101 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 KREMEN1Q96MU8 473 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 FDXACB1Q9BRP7 624 aaPredicted RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 PACSIN1Q9BY11 444 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 RNF208Q9H0X6 261 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
MKS1-211ENST00000581761 NAGPAQ9UK23 515 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 NENFQ9UMX5 172 aa15.78■□□□□ 0.12
MKS1-211ENST00000581761 ATP8B3O60423 1300 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 PTPRJQ12913 1337 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 B4GALT5O43286 388 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 PROZP22891 400 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 TNFSF9P41273 254 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 PSEN2P49810 448 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 MFSD10Q14728 455 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 SURF1Q15526 300 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 FAM187BQ17R55 369 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 ZACNQ401N2 412 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 WDR44Q5JSH3 913 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 TDRD10Q5VZ19 366 aaKnown RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 EEF1DP3Q658K8 133 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 RNF10Q8N5U6 811 aaKnown RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 LRRN4CLQ8ND94 238 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 TATDN2Q93075 761 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 SCLT1Q96NL6 688 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 AGPAT1Q99943 283 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 PI4K2AQ9BTU6 479 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 MINDY3Q9H8M7 445 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 C1orf112Q9NSG2 853 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 SEPT11Q9NVA2 429 aaKnown RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.12
MKS1-211ENST00000581761 TNFSF13BQ9Y275 285 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 CAPN6Q9Y6Q1 641 aa15.77■□□□□ 0.12
MKS1-211ENST00000581761 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.12
MKS1-211ENST00000581761 EVPLQ92817 2033 aa15.77■□□□□ 0.11
MKS1-211ENST00000581761 ANO9A1A5B4 782 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 ENC1O14682 589 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms