RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GLB1L2Q8IW92 636 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 SH2D3CQ8N5H7 860 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 SMC1BQ8NDV3 1235 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 OR56A1Q8NGH5 318 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 ZFP28Q8NHY6 868 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 MDM1Q8TC05 714 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 CEP95Q96GE4 821 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 ZNF778Q96MU6 729 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 MS4A5Q9H3V2 200 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 MSRAQ9UJ68 235 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 MAPRE3Q9UPY8 281 aa6.23□□□□□ -1.41
SMCHD1-207ENST00000581711 TGM5O43548 720 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 PROP1O75360 226 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 ELANEP08246 267 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 SCNN1BP51168 640 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 IL2P60568 153 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 STRN3Q13033 797 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 TAF7LQ5H9L4 462 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 KIF18BQ86Y91 864 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 RHOT2Q8IXI1 618 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 ALOXE3Q9BYJ1 711 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 KLK15Q9H2R5 256 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 KMT5AQ9NQR1 393 aa6.22□□□□□ -1.41
SMCHD1-207ENST00000581711 DRGXA6NNA5 263 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 PPARAQ07869 468 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 SART3Q15020 963 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 SPDYE7PQ495Y7 208 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 MAPKAPK5Q8IW41 473 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 TMEM132CQ8N3T6 1108 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 OR2W6PQ8NHA6 318 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 PHACTR3Q96KR7 559 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 LRIT1Q9P2V4 623 aa6.21□□□□□ -1.42
SMCHD1-207ENST00000581711 IKBKBO14920 756 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 FKBP9O95302 570 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 KPNA1P52294 538 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 MRPS35P82673 323 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 ABHD15Q6UXT9 468 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 FKBP9P1Q75LS8 142 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 CHAC2Q8WUX2 184 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 PDLIM2Q96JY6 352 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 CAAP1Q9H8G2 361 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 KLHL11Q9NVR0 708 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 NOX1Q9Y5S8 564 aa6.2□□□□□ -1.42
SMCHD1-207ENST00000581711 PRSS38A1L453 326 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 NEMP1O14524 444 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 TMEM127O75204 238 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 CNGA1P29973 690 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 PROK1P58294 105 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 MEF2AQ02078 507 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 MFSD14BQ5SR56 506 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 LHFPL2Q6ZUX7 228 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 PDZD4Q76G19 769 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 ACTRT2Q8TDY3 377 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 EMC7Q9NPA0 242 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 CASS4Q9NQ75 786 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 TBCCD1Q9NVR7 557 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 GPRC5DQ9NZD1 345 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 SLC17A6Q9P2U8 582 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 NUMBLQ9Y6R0 609 aa6.19□□□□□ -1.42
SMCHD1-207ENST00000581711 BPIP17213 487 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 POU3F3P20264 500 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 SOX5P35711 763 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 CT47A1Q5JQC4 288 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 PRAMEF14Q5SWL7 426 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 ATXN7L2Q5T6C5 722 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 SLC35B2Q8TB61 432 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 SNX33Q8WV41 574 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 USP7Q93009 1102 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 ZNF70Q9UC06 446 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 TMPRSS11EQ9UL52 423 aa6.18□□□□□ -1.42
SMCHD1-207ENST00000581711 ZFPL1O95159 310 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 GASTP01350 101 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 VIL1P09327 827 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 LSSP48449 732 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 OCA2Q04671 838 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 DHCR24Q15392 516 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 TSHZ3Q63HK5 1081 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 ZNF788Q6ZQV5 615 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 KRT26Q7Z3Y9 468 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 LYSMD2Q8IV50 215 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 RNF31Q96EP0 1072 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 ZSWIM1Q9BR11 485 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 AIFM2Q9BRQ8 373 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 ASB6Q9NWX5 421 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 ARPP21Q9UBL0 812 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
SMCHD1-207ENST00000581711 PJA2O43164 708 aa6.16□□□□□ -1.42
SMCHD1-207ENST00000581711 FLT3LGP49771 235 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms