RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 MIA3Q5JRA6 1907 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 ZMYM2Q9UBW7 1377 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 M0R2N6 131 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 B4GALT5O43286 388 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 RETP07949 1114 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 ELAVL2Q12926 359 aaKnown RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 RAB33AQ14088 237 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 PPP2R5DQ14738 602 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 INF2Q27J81 1249 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 DYDC2Q96IM9 177 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 XPNPEP1Q9NQW7 623 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 GDE1Q9NZC3 331 aa14.14□□□□□ -0.15
SS18-219ENST00000581570 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
SS18-219ENST00000581570 MYH15Q9Y2K3 1946 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 SHISA7A6NL88 538 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 MAN2B1O00754 1011 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 MARCH6O60337 910 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 LRP3O75074 770 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 KIF4AO95239 1232 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 TDGF1P13385 188 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 OR1D2P34982 312 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 SSRP1Q08945 709 aaKnown RBP14.13□□□□□ -0.15
SS18-219ENST00000581570 CAPSQ13938 189 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SS18-219ENST00000581570 NCAPH2Q6IBW4 605 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 PRR23BQ6ZRT6 265 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 RTL10Q7L3V2 364 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 FBXL16Q8N461 479 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 DAGLBQ8NCG7 672 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 ASAP3Q8TDY4 903 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 ELSPBP1Q96BH3 223 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 CHRDQ9H2X0 955 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 PATJQ8NI35 1801 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 ACACBO00763 2458 aa14.13□□□□□ -0.15
SS18-219ENST00000581570 THP07101 528 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 RHOP08100 348 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 PDIA3P30101 505 aaKnown RBP14.12□□□□□ -0.15
SS18-219ENST00000581570 ARL2P36404 184 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 CYP4A11Q02928 519 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 ZNF687Q8N1G0 1237 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 IER2Q9BTL4 223 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 NFKBIZQ9BYH8 718 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 AGXT2Q9BYV1 514 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 LMAN1LQ9HAT1 526 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 SEMA4GQ9NTN9 838 aa14.12□□□□□ -0.15
SS18-219ENST00000581570 SPTBN2O15020 2390 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 DEXIO95424 95 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 GLRA2P23416 452 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 RPS6KB1P23443 525 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 CCR3P51677 355 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 SIM2Q14190 667 aaPredicted RBP14.11□□□□□ -0.15
SS18-219ENST00000581570 GRM2Q14416 872 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 NPY5RQ15761 445 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 CSRP2Q16527 193 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 SLC5A9Q2M3M2 681 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 PPP4R3AQ6IN85 833 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 POTEHQ6S545 545 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
SS18-219ENST00000581570 PRR23CQ6ZRP0 262 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 NEK8Q86SG6 692 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 HAS1Q92839 578 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 KCNB2Q92953 911 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 DOCK6Q96HP0 2047 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 MTRRQ9UBK8 725 aa14.11□□□□□ -0.15
SS18-219ENST00000581570 CCDC194A0A1B0GVG4 234 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 PTGESO14684 152 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 TBX3O15119 743 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 CCNT1O60563 726 aaKnown RBP14.1□□□□□ -0.15
SS18-219ENST00000581570 DGAT1O75907 488 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 SLITRK3O94933 977 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 GCFC2P16383 781 aaKnown RBP14.1□□□□□ -0.15
SS18-219ENST00000581570 CEBPBP17676 345 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 PTPN2P17706 415 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 FGFR3P22607 806 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 BMP2KLQ5H9B9 411 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 FAM177A1Q8N128 213 aaPredicted RBP14.1□□□□□ -0.15
SS18-219ENST00000581570 FAM3CQ92520 227 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
SS18-219ENST00000581570 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 AVENQ9NQS1 362 aaPredicted RBP14.1□□□□□ -0.15
SS18-219ENST00000581570 SNTG2Q9NY99 539 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 SNX14Q9Y5W7 946 aa14.1□□□□□ -0.15
SS18-219ENST00000581570 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms