RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ADCY7P51828 1080 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 TBX4P57082 545 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 ARHGAP29Q52LW3 1261 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 FAM180AQ6UWF9 173 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 USP45Q70EL2 814 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 CLEC14AQ86T13 490 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 MB21D1Q8N884 522 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 PLA2G15Q8NCC3 412 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 SLC35G2Q8TBE7 412 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 PAWRQ96IZ0 340 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 GPR87Q9BY21 358 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 GNALP38405 381 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 WASP42768 502 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 NPEPPSP55786 919 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 MEF2AQ02078 507 aaPredicted RBP6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 FSTL1Q12841 308 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 IL10RAQ13651 578 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 SEPT2Q15019 361 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 C3orf36Q3SXR2 165 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 ATAT1Q5SQI0 421 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 FKBP15Q5T1M5 1219 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 SLC4A10Q6U841 1118 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 B3GNT9Q6UX72 402 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 TAS1R1Q7RTX1 841 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 SYNE4Q8N205 404 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 PRR18Q8N4B5 295 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 SNX33Q8WV41 574 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 HPS3Q969F9 1004 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 PGBD4Q96DM1 585 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 NRDE2Q9H7Z3 1164 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 IL23AQ9NPF7 189 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 ING3Q9NXR8 418 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 OBP2AQ9NY56 170 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 PCDHA13Q9Y5I0 950 aa6.04□□□□□ -1.44
SMCHD1-205ENST00000581383 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 ALDH1A2O94788 518 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 TOX4O94842 621 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MYBP10242 640 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 GNAT2P19087 354 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MGAT2Q10469 447 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 SAFB2Q14151 953 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 SPTY2D1Q68D10 685 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MFSD5Q6N075 450 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 Q6ZVL8 140 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MIGA2Q7L4E1 593 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MRGPRGQ86SM5 289 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 AMER2Q8N7J2 671 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 ATXN2LQ8WWM7 1075 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 KAT5Q92993 513 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 HDAC10Q969S8 669 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 ZG16BQ96DA0 208 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MVB12AQ96EY5 273 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 TAAR9Q96RI9 348 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 MAP3K14Q99558 947 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
SMCHD1-205ENST00000581383 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 GOLGA6L6A8MZA4 724 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 DTNBO60941 627 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 FAM20BO75063 409 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 IPO13O94829 963 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 JUNP05412 331 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 ECHS1P30084 290 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 PTGS2P35354 604 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 KIR2DL3P43628 341 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 SCNN1GP51170 649 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 PER3P56645 1201 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 PGS1Q32NB8 556 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 C19orf54Q5BKX5 351 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 Q6ZRM9 215 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 DGKHQ86XP1 1220 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 RHOT1Q8IXI2 618 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 HOXB13Q92826 284 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 RUNDC1Q96C34 613 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 ACO2Q99798 780 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 TTPALQ9BTX7 342 aa6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 ZNF703Q9H7S9 590 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 C14orf93Q9H972 538 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 DDX20Q9UHI6 824 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-205ENST00000581383 TMEM191CA6NGB0 347 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 FAM171A2A8MVW0 826 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 ERC2O15083 957 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 PHF2O75151 1096 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 GRM3Q14832 879 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 GAGE13Q4V321 117 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 CCDC146Q8IYE0 955 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 ELOA2Q8IYF1 753 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 CAMKK1Q8N5S9 505 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 DIS3LQ8TF46 1054 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 LARP4BQ92615 738 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 RAB24Q969Q5 203 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 GPHA2Q96T91 129 aa6.01□□□□□ -1.45
SMCHD1-205ENST00000581383 WDR26Q9H7D7 661 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms