RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 CWH43Q9H720 699 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 RPF1Q9H9Y2 349 aaKnown RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 PLEKHA5Q9HAU0 1116 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
MKS1-210ENST00000581180 TBC1D13Q9NVG8 400 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 INPP5FQ9Y2H2 1132 aa16.44■□□□□ 0.22
MKS1-210ENST00000581180 SCN1AP35498 2009 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 CA3P07451 260 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 KCNE1P15382 129 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 SCNN1GP51170 649 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 WNT7BP56706 349 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 LRRC63Q05C16 580 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 NAB2Q15742 525 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 CBWD2Q8IUF1 395 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 LRRC43Q8N309 656 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 URGCPQ8TCY9 931 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 ZMAT2Q96NC0 199 aaKnown RBP16.43■□□□□ 0.22
MKS1-210ENST00000581180 PPP1R10Q96QC0 940 aaKnown RBP16.43■□□□□ 0.22
MKS1-210ENST00000581180 MED15Q96RN5 788 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 DUSP9Q99956 384 aaKnown RBP16.43■□□□□ 0.22
MKS1-210ENST00000581180 MRPL9Q9BYD2 267 aaKnown RBP16.43■□□□□ 0.22
MKS1-210ENST00000581180 KIAA1586Q9HCI6 787 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 MSRAQ9UJ68 235 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 CTNND2Q9UQB3 1225 aa16.43■□□□□ 0.22
MKS1-210ENST00000581180 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
MKS1-210ENST00000581180 SMIM28A0A1B0GU29 152 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
MKS1-210ENST00000581180 B4GALT3O60512 393 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 POMCP01189 267 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 NR2F2P24468 414 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 DNAJB2P25686 324 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 CASP4P49662 377 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 DSC1Q08554 894 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 GRIK3Q13003 919 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 PAK1Q13153 545 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 SNRNP35Q16560 246 aaKnown RBP16.42■□□□□ 0.22
MKS1-210ENST00000581180 SASS6Q6UVJ0 657 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 CD302Q8IX05 232 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 FIBCD1Q8N539 461 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 CLP1Q92989 425 aaKnown RBP16.42■□□□□ 0.22
MKS1-210ENST00000581180 RPS6KC1Q96S38 1066 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 TSG101Q99816 390 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 MYO7AQ13402 2215 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
MKS1-210ENST00000581180 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 ZNF233A6NK53 670 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 EXOC3O60645 756 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 DDHD2O94830 711 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 THP07101 528 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
MKS1-210ENST00000581180 STX17P56962 302 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 FKBP3Q00688 224 aaKnown RBP16.41■□□□□ 0.22
MKS1-210ENST00000581180 TAP1Q03518 808 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 ADAM9Q13443 819 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 ZBTB6Q15916 424 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
MKS1-210ENST00000581180 GLRA4Q5JXX5 417 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 FUCA2Q9BTY2 467 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 ASB7Q9H672 318 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
MKS1-210ENST00000581180 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
MKS1-210ENST00000581180 MAPK13O15264 365 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 AKAP3O75969 853 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 IL18RAPO95256 599 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 TYRO3Q06418 890 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 HSP90AA2PQ14568 343 aaPredicted RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 STX1AQ16623 288 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 HABP4Q5JVS0 413 aaKnown RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 SPRED2Q7Z698 418 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 TIFAQ96CG3 184 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
MKS1-210ENST00000581180 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 DERAQ9Y315 318 aa16.4■□□□□ 0.22
MKS1-210ENST00000581180 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 SYCE3A1L190 88 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 CETN3O15182 167 aa16.39■□□□□ 0.21
MKS1-210ENST00000581180 NFICP08651 508 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms