RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 INPPL1O15357 1258 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 TBX10O75333 385 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 SMC2O95347 1197 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 GCNT3O95395 438 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 MBD3O95983 291 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 MCF2P10911 925 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 CASP1P29466 404 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 NDUFV1P49821 464 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 POU5F1Q01860 360 aaKnown RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 CLUL1Q15846 466 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 COBLL1Q53SF7 1204 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 PLPP4Q5VZY2 271 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 SLFN12LQ6IEE8 588 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 MPZL3Q6UWV2 235 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 GJD3Q8N144 294 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 SMG8Q8ND04 991 aaKnown RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 CPB2Q96IY4 423 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 MSLNLQ96KJ4 702 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 ACCSQ96QU6 501 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 CDCA3Q99618 268 aaPredicted RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 TCF25Q9BQ70 676 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 TARS2Q9BW92 718 aaKnown RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 TRIM6Q9C030 488 aaPredicted RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 NGRNQ9NPE2 291 aaKnown RBP10.81□□□□□ -0.68
GGA3-209ENST00000580646 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 ENTPD7Q9NQZ7 604 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 CLEC1BQ9P126 229 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 CD207Q9UJ71 328 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 STYXL1Q9Y6J8 313 aa10.81□□□□□ -0.68
GGA3-209ENST00000580646 HNRNPDLO14979 420 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 KIAA0391O15091 583 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 CLDN3O15551 220 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 MBTPS2O43462 519 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
GGA3-209ENST00000580646 KIF20AO95235 890 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 GALTP07902 379 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 MYBP10242 640 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 ITGA4P13612 1032 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 PTMSP20962 102 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 LIG4P49917 911 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 CASP5P51878 434 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 RNASELQ05823 741 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 MCL1Q07820 350 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 SMAD4Q13485 552 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 PNOCQ13519 176 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 KYAT1Q16773 422 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 DUSP6Q16828 381 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 ZC2HC1CQ53FD0 456 aaPredicted RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 URGCPQ8TCY9 931 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 TMEM174Q8WUU8 243 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 SMARCE1Q969G3 411 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 TMEM169Q96HH4 297 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 ZMYND15Q9H091 742 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 RNF39Q9H2S5 420 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 CGNQ9P2M7 1197 aaKnown RBP10.8□□□□□ -0.68
GGA3-209ENST00000580646 KANSL3Q9P2N6 904 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 IPPQ9Y573 584 aa10.8□□□□□ -0.68
GGA3-209ENST00000580646 FSD2A1L4K1 749 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 DDHD2O94830 711 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 NPTXRO95502 500 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 GLP2RO95838 553 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 ALDH2P05091 517 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 GARTP22102 1010 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 SSTR3P32745 418 aaPredicted RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 MCM4P33991 863 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 GRM5P41594 1212 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 SLC11A1P49279 550 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 RBM10P98175 930 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 STK4Q13043 487 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 SMC1AQ14683 1233 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 BMS1Q14692 1282 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 NOLC1Q14978 699 aaKnown RBP eCLIP10.79□□□□□ -0.68
GGA3-209ENST00000580646 SMAD2Q15796 467 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 EEF1DP3Q658K8 133 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 TMEM173Q86WV6 379 aaPredicted RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 ZNF280BQ86YH2 543 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 KIAA0895Q8NCT3 520 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 SCFD1Q8WVM8 642 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 BICD1Q96G01 975 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 IGSF21Q96ID5 467 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 FGFBP2Q9BYJ0 223 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 GBP3Q9H0R5 595 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 CDT1Q9H211 546 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 TBC1D7Q9P0N9 293 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms