RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 UBE2ZQ9H832 354 aaPredicted RBP17.93■□□□□ 0.46
IFT20-210ENST00000580357 HPSEQ9Y251 543 aa17.93■□□□□ 0.46
IFT20-210ENST00000580357 STYXL1Q9Y6J8 313 aa17.93■□□□□ 0.46
IFT20-210ENST00000580357 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
IFT20-210ENST00000580357 SMIM28A0A1B0GU29 152 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 TADA2AO75478 443 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 PPP1R37O75864 691 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 OSTNP61366 133 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 COASYQ13057 564 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 UNC13DQ70J99 1090 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 GPR65Q8IYL9 337 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 SYCP3Q8IZU3 236 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 IGFLR1Q9H665 355 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 TBC1D7Q9P0N9 293 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 CNTN3Q9P232 1028 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 SERTAD1Q9UHV2 236 aa17.92■□□□□ 0.46
IFT20-210ENST00000580357 CDH23Q9H251 3354 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 LDHAP00338 332 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 SRGAP2BP0DMP2 458 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 NRIP1P48552 1158 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 ELAVL2Q12926 359 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 PLPP4Q5VZY2 271 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 KANK3Q6NY19 840 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 DCLRE1AQ6PJP8 1040 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 CEP120Q8N960 986 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 SNX27Q96L92 541 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 PPP1R10Q96QC0 940 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 MSTO1Q9BUK6 570 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 ZBP1Q9H171 429 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 RPF1Q9H9Y2 349 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 MRPL17Q9NRX2 175 aaKnown RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 CLDND1Q9NY35 253 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
IFT20-210ENST00000580357 PRG3Q9Y2Y8 225 aaPredicted RBP17.91■□□□□ 0.46
IFT20-210ENST00000580357 C2orf71A6NGG8 1288 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 TNFRSF10AO00220 468 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 KIAA0391O15091 583 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 EIF3DO15371 548 aaKnown RBP eCLIP17.9■□□□□ 0.46
IFT20-210ENST00000580357 XPOTO43592 962 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 ACTN4O43707 911 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 B4GALT3O60512 393 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 SOD2P04179 222 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 RPL9P32969 192 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 AFMP43652 599 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 PSMD2Q13200 908 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 NAB2Q15742 525 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 DUSP6Q16828 381 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 SLC10A6Q3KNW5 377 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 LEXMQ3ZCV2 418 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 EP400NLQ6ZTU2 488 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 PPFIBP1Q86W92 1011 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 TMEM173Q86WV6 379 aaPredicted RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 PAGE5Q96GU1 130 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 EMILIN2Q9BXX0 1053 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 AGO2Q9UKV8 859 aaKnown RBP17.9■□□□□ 0.46
IFT20-210ENST00000580357 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
IFT20-210ENST00000580357 PLXNA4Q9HCM2 1894 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 ANKRD63C9JTQ0 380 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 CSPG5O95196 566 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 EFEMP2O95967 443 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 ADRB2P07550 413 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 GARTP22102 1010 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 NDUFA8P51970 172 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 SNRPFP62306 86 aaKnown RBP17.89■□□□□ 0.45
IFT20-210ENST00000580357 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 TMEM184AQ6ZMB5 413 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 ADGRD2Q7Z7M1 963 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 FSIP1Q8NA03 581 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 BCL7CQ8WUZ0 217 aaPredicted RBP17.89■□□□□ 0.45
IFT20-210ENST00000580357 POMGNT1Q8WZA1 660 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 CCDC47Q96A33 483 aaKnown RBP17.89■□□□□ 0.45
IFT20-210ENST00000580357 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 HERC2P3Q9BVR0 1158 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 HAPLN2Q9GZV7 340 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 MARCH5Q9NX47 278 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.45
IFT20-210ENST00000580357 SPTBN5Q9NRC6 3674 aaKnown RBP17.88■□□□□ 0.45
IFT20-210ENST00000580357 TDRD15B5MCY1 1934 aaKnown RBP17.88■□□□□ 0.45
IFT20-210ENST00000580357 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 TMEM189-UBE2V1I3L0A0 370 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 PER2O15055 1255 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 ZNF202O95125 648 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 C1RP00736 705 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 URODP06132 367 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 MYBP10242 640 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 KCNA5P22460 613 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 CA8P35219 290 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 CREMQ03060 361 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 PPP2R3AQ06190 1150 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 FAM26FQ5R3K3 315 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 FUT10Q6P4F1 479 aa17.88■□□□□ 0.45
IFT20-210ENST00000580357 SLC39A4Q6P5W5 647 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms