RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 PARP14Q460N5 1801 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 C5orf42Q9H799 3197 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 EYA2O00167 538 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 KIAA0355O15063 1070 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 DLX3O60479 287 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 CAPNS1P04632 268 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 NCAM1P13591 858 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 SLC5A1P13866 664 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 ZEB1P37275 1124 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 LSAMPQ13449 338 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 LRRC41Q15345 812 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 CCDC184Q52MB2 194 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 PRAMEF19Q5SWL8 479 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 MROH9Q5TGP6 573 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 MFSD14CQ5VZR4 134 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 DENND5AQ6IQ26 1287 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 NSMFQ6X4W1 530 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 TIFAQ96CG3 184 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 C1orf159Q96HA4 380 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 C1QTNF1Q9BXJ1 281 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 ARHGEF4Q9NR80 690 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 BTBD7Q9P203 1132 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 SIT1Q9Y3P8 196 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 COL11A1P12107 1806 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 ZNF236Q9UL36 1845 aa7.82□□□□□ -1.16
PPP4R1-216ENST00000580283 MROH7-TTC4A0A0A0MT08 1334 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 IL16Q14005 1332 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 SLC15A5A6NIM6 579 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 ARNTLO00327 626 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 MSCO60682 206 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 FGFR1P11362 822 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 LCP1P13796 627 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 KCNQ1P51787 676 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 AFF3P51826 1226 aaKnown RBP7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 MECOMQ03112 1051 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 SSRP1Q08945 709 aaKnown RBP7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 IFRD2Q12894 506 aaPredicted RBP7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 DDX10Q13206 875 aaKnown RBP7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 GRB14Q14449 540 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 FAM129CQ86XR2 697 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 TMEFF1Q8IYR6 380 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 ARRDC4Q8NCT1 418 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 PANK1Q8TE04 598 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 SPATA9Q9BWV2 254 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 BCAS3Q9H6U6 928 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 CLDND1Q9NY35 253 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 PFDN2Q9UHV9 154 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 DENND2AQ9ULE3 1009 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 BRWD1Q9NSI6 2320 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 LRRC37A2A6NM11 1700 aa7.81□□□□□ -1.16
PPP4R1-216ENST00000580283 C19orf81C9J6K1 198 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 H7BY64 318 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 ASGR2P07307 311 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 CLTBP09497 229 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 PABPC1P11940 636 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 PMLP29590 882 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 LIMS1P48059 325 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 TIMM10P62072 90 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 RBL2Q08999 1139 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 ATP2B3Q16720 1220 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 FAM47AQ5JRC9 791 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 TMEM240Q5SV17 173 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 LCNL1Q6ZST4 164 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 SPATC1Q76KD6 591 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 RIOX2Q8IUF8 465 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 PWWP2AQ96N64 755 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 IPO9Q96P70 1041 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 AS3MTQ9HBK9 375 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 GPR27Q9NS67 375 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 ABCF2Q9UG63 623 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 X6R8D5 127 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 MCM3APO60318 1980 aa7.8□□□□□ -1.16
PPP4R1-216ENST00000580283 A0A0G2JMZ2 1700 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 KBTBD13C9JR72 458 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 SEPT4O43236 478 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 FPGSQ05932 587 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 LBX2Q6XYB7 198 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 Q8N1Y9 231 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 DCAF4Q8WV16 495 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 NSUN4Q96CB9 384 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 SNX27Q96L92 541 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 CDC6Q99741 560 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 PRKRIP1Q9H875 184 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 TMOD4Q9NZQ9 345 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 HERC5Q9UII4 1024 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 NPFFR2Q9Y5X5 522 aa7.79□□□□□ -1.16
PPP4R1-216ENST00000580283 ASNSP08243 561 aa7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 ATF2P15336 505 aa7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 IGFBP6P24592 240 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 ADORA2AP29274 412 aa7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 SLC6A11P48066 632 aa7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 RSPO2Q6UXX9 243 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
PPP4R1-216ENST00000580283 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms