RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PPP4R3AQ6IN85 833 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LNX1Q8TBB1 728 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PRMT8Q9NR22 394 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 A0A1B0GUA9 196 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CPLX1O14810 134 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 SLC37A4O43826 429 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DGAT1O75907 488 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CD72P21854 359 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 AKAP5P24588 427 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TARSP26639 723 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PSMA5P28066 241 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 EVCP57679 992 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NTHL1P78549 312 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MBTD1Q05BQ5 628 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 AMHR2Q16671 573 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ST3GAL2Q16842 350 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 INF2Q27J81 1249 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 AXDND1Q5T1B0 1012 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CEP57Q86XR8 500 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CELF5Q8N6W0 485 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ITFG1Q8TB96 612 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 SLC7A14Q8TBB6 771 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DNASE1L2Q92874 299 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 KCNB2Q92953 911 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 KXD1Q9BQD3 176 aa13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 WRAP73Q9P2S5 460 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NPTXRO95502 500 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CPA1P15085 419 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TGM1P22735 817 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RPS6KB1P23443 525 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CCT2P78371 535 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CAPSQ13938 189 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RAB33AQ14088 237 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NEK8Q86SG6 692 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 SLFN12Q8IYM2 578 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.24
CDK5RAP3-216ENST00000579853 FASNP49327 2511 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-216ENST00000579853 BAG4O95429 457 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 THP07101 528 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RETP07949 1114 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MTAPQ13126 283 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ELSPBP1Q96BH3 223 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DYDC2Q96IM9 177 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 AVENQ9NQS1 362 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ANKEF1Q9NU02 776 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RGL1Q9NZL6 768 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 KLK14Q9P0G3 267 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DSPP15924 2871 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SLC30A4O14863 429 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CDC45O75419 566 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 KIF4AO95239 1232 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LYPLA2O95372 231 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 XBP1P17861 261 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HSPA4P34932 840 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 OR1D2P34982 312 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ARL2P36404 184 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CCR3P51677 355 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CYP4A11Q02928 519 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CTTNQ14247 550 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NPY5RQ15761 445 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TSSK4Q6SA08 328 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HASPINQ8TF76 798 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 IRF7Q92985 503 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CHAMP1Q96JM3 812 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CHRDQ9H2X0 955 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 BRD9Q9H8M2 597 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PRMT7Q9NVM4 692 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms