RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BRD1O95696 1058 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 SOD2P04179 222 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 EDN1P05305 212 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 ADH1AP07327 375 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 HOXB8P17481 243 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 LTBRP36941 435 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 AFMP43652 599 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 GLUD2P49448 558 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 ZNF131P52739 623 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 ASIC1P78348 528 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 NUCB2P80303 420 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 RBM10P98175 930 aaKnown RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 PPP2R3AQ06190 1150 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 DLX2Q07687 328 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 MCL1Q07820 350 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 DSC1Q08554 894 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 ELAVL2Q12926 359 aaKnown RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 POSTNQ15063 836 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 DUSP6Q16828 381 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 CTC1Q2NKJ3 1217 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 AXDND1Q5T1B0 1012 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 FAM171A1Q5VUB5 890 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 SHC4Q6S5L8 630 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 TAS1R1Q7RTX1 841 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 ZNF720Q7Z2F6 126 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 PALB2Q86YC2 1186 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 CEP120Q8N960 986 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 GSTCDQ8NEC7 633 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 LRRC15Q8TF66 581 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 BCL7CQ8WUZ0 217 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 POMGNT1Q8WZA1 660 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 CASP10Q92851 521 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 B3GALT6Q96L58 329 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 UROC1Q96N76 676 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 NECAB3Q96P71 396 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 TNMDQ9H2S6 317 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 RPF1Q9H9Y2 349 aaKnown RBP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 PTPRHQ9HD43 1115 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 DPP7Q9UHL4 492 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 SF3B1O75533 1304 aaKnown RBP eCLIP7.15□□□□□ -1.26
TRAF4-213ENST00000578917 REV3LO60673 3130 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 A0A0B4J269 797 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 A0A1B0GVL5 298 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 F8W810 466 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 OGTO15294 1046 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 XPOTO43592 962 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CNPP09543 421 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 SPATA31D3P0C874 917 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 MYBP10242 640 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 PROZP22891 400 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CMA1P23946 247 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 RPL9P32969 192 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ACOT2P49753 483 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CLCNKBP51801 687 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 GTF2BQ00403 316 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CREMQ03060 361 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 SPAG1Q07617 926 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ALCAMQ13740 583 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 COL4A6Q14031 1691 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 PTPN14Q15678 1187 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ATAT1Q5SQI0 421 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ANKRD54Q6NXT1 300 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 FUT10Q6P4F1 479 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 PDXDC1Q6P996 788 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 SPATA31D4Q6ZUB0 917 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 MAP4K3Q8IVH8 894 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 GLYCTKQ8IVS8 523 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 GJD3Q8N144 294 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 LEO1Q8WVC0 666 aaPredicted RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CCDC47Q96A33 483 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 C18orf25Q96B23 403 aaPredicted RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 HVCN1Q96D96 273 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 DNAJC19Q96DA6 116 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 KIF12Q96FN5 646 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CCDC34Q96HJ3 373 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 SNX27Q96L92 541 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 KLHL5Q96PQ7 755 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 POP1Q99575 1024 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 PAAF1Q9BRP4 392 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 TTPALQ9BTX7 342 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 GPR62Q9BZJ7 368 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ZBP1Q9H171 429 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CXCL16Q9H2A7 254 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 BLZF1Q9H2G9 400 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 TMEM206Q9H813 350 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 PLEKHA5Q9HAU0 1116 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 MAGEF1Q9HAY2 307 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 TSHZ2Q9NRE2 1034 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 KBTBD4Q9NVX7 518 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CLEC1BQ9P126 229 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 CACNG4Q9UBN1 327 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 ZMYM2Q9UBW7 1377 aa7.14□□□□□ -1.27
TRAF4-213ENST00000578917 AGO2Q9UKV8 859 aaKnown RBP7.14□□□□□ -1.27
TRAF4-213ENST00000578917 R3HCC1Q9Y3T6 440 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms