RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 LILRA6Q6PI73 481 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 PRSS55Q6UWB4 352 aaPredicted RBP17.44■□□□□ 0.38
CRLF3-203ENST00000578692 OTOP3Q7RTS5 596 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 TAS1R3Q7RTX0 852 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 CEP57Q86XR8 500 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 CDK5RAP3Q96JB5 506 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 TTPALQ9BTX7 342 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
CRLF3-203ENST00000578692 PTPRHQ9HD43 1115 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 MTCL1Q9Y4B5 1905 aaKnown RBP17.44■□□□□ 0.38
CRLF3-203ENST00000578692 TRIOO75962 3097 aa17.44■□□□□ 0.38
CRLF3-203ENST00000578692 SLC16A4O15374 487 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 RFPL2O75678 378 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 BRD1O95696 1058 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 GRM5P41594 1212 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 YARSP54577 528 aaKnown RBP17.43■□□□□ 0.38
CRLF3-203ENST00000578692 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 ELAVL2Q12926 359 aaKnown RBP17.43■□□□□ 0.38
CRLF3-203ENST00000578692 GLRA4Q5JXX5 417 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
CRLF3-203ENST00000578692 TCHPQ9BT92 498 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
CRLF3-203ENST00000578692 RHOBTB2Q9BYZ6 727 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 CDT1Q9H211 546 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 C2orf16Q68DN1 1984 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 DENND4AQ7Z401 1863 aa17.43■□□□□ 0.38
CRLF3-203ENST00000578692 SMIM28A0A1B0GU29 152 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 PLA2G4BP0C869 781 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
CRLF3-203ENST00000578692 SMTNP53814 917 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 SLC12A3P55017 1021 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 OSTNP61366 133 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 ZNF568Q3ZCX4 644 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 DCLRE1AQ6PJP8 1040 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 CEP120Q8N960 986 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 LNX1Q8TBB1 728 aaPredicted RBP17.42■□□□□ 0.38
CRLF3-203ENST00000578692 PIK3R5Q8WYR1 880 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 SMG7Q92540 1137 aaKnown RBP17.42■□□□□ 0.38
CRLF3-203ENST00000578692 AK8Q96MA6 479 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 CLSTN3Q9BQT9 956 aa17.42■□□□□ 0.38
CRLF3-203ENST00000578692 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
CRLF3-203ENST00000578692 TOPORSQ9NS56 1045 aaPredicted RBP17.42■□□□□ 0.38
CRLF3-203ENST00000578692 B3GAT3O94766 335 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 PAPLNO95428 1278 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 MCF2P10911 925 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 PLS3P13797 630 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 CLCNKBP51801 687 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 STRN3Q13033 797 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 PSMD5Q16401 504 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 XKR4Q5GH76 650 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 IER5LQ5T953 404 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 ALKAL1Q6UXT8 129 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 BRAPQ7Z569 592 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 ZNF707Q96C28 371 aaPredicted RBP17.41■□□□□ 0.38
CRLF3-203ENST00000578692 UROC1Q96N76 676 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 ACAP3Q96P50 834 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 KCND2Q9NZV8 630 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 TRIP11Q15643 1979 aa17.41■□□□□ 0.38
CRLF3-203ENST00000578692 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 SLC26A4O43511 780 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 PROZP22891 400 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 IGFBP6P24592 240 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 UBA7P41226 1012 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 UPP1Q16831 310 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 TMEM119Q4V9L6 283 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 MPZL3Q6UWV2 235 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 STAMQ92783 540 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 CALML4Q96GE6 196 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 ZBTB45Q96K62 511 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 PRRX2Q99811 253 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 PRKD2Q9BZL6 878 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 SMOC2Q9H3U7 446 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 MYH11P35749 1972 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 NPHP3-ACAD11A0A0J9YXS1 232 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 ABLIM1O14639 778 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 ZMYND10O75800 440 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 BMP15O95972 392 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 PDGFBP01127 241 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 AVPR2P30518 371 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 GBP2P32456 591 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 NHLH1Q02575 133 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 CUL4AQ13619 759 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 ARSHQ5FYA8 562 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 KCNK12Q9HB15 430 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
CRLF3-203ENST00000578692 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
CRLF3-203ENST00000578692 CLUHO75153 1309 aa17.39■□□□□ 0.37
CRLF3-203ENST00000578692 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
CRLF3-203ENST00000578692 N4BP1O75113 896 aaKnown RBP17.39■□□□□ 0.37
CRLF3-203ENST00000578692 TOM1L1O75674 476 aa17.39■□□□□ 0.37
CRLF3-203ENST00000578692 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
CRLF3-203ENST00000578692 FGFR3P22607 806 aa17.39■□□□□ 0.37
CRLF3-203ENST00000578692 SOX4Q06945 474 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms