RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 NFXL1Q6ZNB6 911 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 SPATA31D4Q6ZUB0 917 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 TRMT1LQ7Z2T5 733 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 CMTR1Q8N1G2 835 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 FANCBQ8NB91 859 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 CCDC51Q96ER9 411 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 CEP89Q96ST8 783 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 RIT2Q99578 217 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 KXD1Q9BQD3 176 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 COLEC11Q9BWP8 271 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 ARRDC1-AS1Q9H2J1 176 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 TRPV5Q9NQA5 729 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 BARHL2Q9NY43 387 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 SAMM50Q9Y512 469 aa8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 RBM8AQ9Y5S9 174 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 SF3B1O75533 1304 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDK5RAP3-209ENST00000578663 NOTCH4Q99466 2003 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TDRD15B5MCY1 1934 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ESYT2A0FGR8 921 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SMCO2A6NFE2 343 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MAFO75444 373 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 C8AP07357 584 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MYBP10242 640 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CEACAM1P13688 526 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RXRAP19793 462 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HOXA6P31267 233 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HOXA11P31270 313 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MCM5P33992 734 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 NTHL1P78549 312 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 KCNC4Q03721 635 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 UGCGQ16739 394 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 UVSSAQ2YD98 709 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PLA2G2CQ5R387 149 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PPM1LQ5SGD2 360 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RNF43Q68DV7 783 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 C1orf228Q6PIY5 440 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SRGAP1Q7Z6B7 1085 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SGMS1Q86VZ5 419 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 LONP2Q86WA8 852 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RHPN2Q8IUC4 686 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ST13P5Q8NFI4 369 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ITFG1Q8TB96 612 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 LENG9Q96B70 501 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ELSPBP1Q96BH3 223 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MSANTD3Q96H12 275 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 NLRP4Q96MN2 994 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MKNK1Q9BUB5 465 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 IFT122Q9HBG6 1241 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 AVENQ9NQS1 362 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HEBP1Q9NRV9 189 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RBM28Q9NW13 759 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SUCLA2Q9P2R7 463 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ADAM28Q9UKQ2 775 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RAXQ9Y2V3 346 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SLC12A7Q9Y666 1083 aa8.02□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 KIF26AQ9ULI4 1882 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ARL5CA6NH57 179 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 AXIN1O15169 862 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 REC8O95072 547 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 ITGA4P13612 1032 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 AXLP30530 894 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CXCL12P48061 93 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MLLT6P55198 1093 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 FUT2Q10981 343 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MTERF2Q49AM1 385 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PABPC1LQ4VXU2 614 aaKnown RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PRR16Q569H4 304 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TCEAL6Q6IPX3 200 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PDXDC1Q6P996 788 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MICU3Q86XE3 530 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 EXOC8Q8IYI6 725 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 HACE1Q8IYU2 909 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SPEM1Q8N4L4 309 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SMG8Q8ND04 991 aaKnown RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 TCEAL3Q969E4 200 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 GIT1Q9Y2X7 761 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 COL4A3BPQ9Y5P4 624 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 POLQO75417 2590 aa8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SETD2Q9BYW2 2564 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-209ENST00000578663 PDCD11Q14690 1871 aaKnown RBP8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 MUC22E2RYF6 1773 aaPredicted RBP8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 C4orf47A7E2U8 309 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CHURC1-FNTBB4DL54 471 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 F8W810 466 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 SLC27A2O14975 620 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 GAS7O60861 476 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 EPN2O95208 641 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 STBD1O95210 358 aa8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 RPL17P18621 184 aaKnown RBP8□□□□□ -1.13
CDK5RAP3-209ENST00000578663 CSRP1P21291 193 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms