RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 GLIS3Q8NEA6 775 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 MYLIPQ8WY64 445 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 HAPLN2Q9GZV7 340 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 LMBRD1Q9NUN5 540 aa12.56□□□□□ -0.4
ERBB2-208ENST00000578630 PTPRSQ13332 1948 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 NRP1O14786 923 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 EXTL3O43909 919 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 KCNE1P15382 129 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 ADSSP30520 456 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 ACOT2P49753 483 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 GUCD1Q96NT3 240 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 ASB7Q9H672 318 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 ALG13Q9NP73 1137 aaKnown RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 DNAJB4Q9UDY4 337 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
ERBB2-208ENST00000578630 LAMA2P24043 3122 aaKnown RBP12.55□□□□□ -0.4
ERBB2-208ENST00000578630 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 TISP43B9A030 160 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 PDXKO00764 312 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 PTGESO14684 152 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 TGFB1I1O43294 461 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 TADA2AO75478 443 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 IL18RAPO95256 599 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 ITGB1P05556 798 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 CXCL8P10145 99 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 HOXD13P35453 343 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 PPP1R2P41236 205 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 TNFSF9P41273 254 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 SLC11A1P49279 550 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 DSC1Q08554 894 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 ZNF658Q5TYW1 1059 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 GPD1LQ8N335 351 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 GUF1Q8N442 669 aaKnown RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 NOC3LQ8WTT2 800 aaKnown RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 POF1BQ8WVV4 589 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
ERBB2-208ENST00000578630 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 SNX27Q96L92 541 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 UROC1Q96N76 676 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 CBWD1Q9BRT8 395 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 IKZF4Q9H2S9 585 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 STXBP5LQ9Y2K9 1186 aa12.54□□□□□ -0.4
ERBB2-208ENST00000578630 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 GBF1Q92538 1859 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 CLIC2O15247 247 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 GRM6O15303 877 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 FAM189A1O60320 539 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 LPXNO60711 386 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 ADRB2P07550 413 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 PBX3P40426 434 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 STIM1Q13586 685 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 MYBPC2Q14324 1141 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 SURF1Q15526 300 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 ENOX2Q16206 610 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 CAMK4Q16566 473 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 NT5DC4Q86YG4 428 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 PPP1R10Q96QC0 940 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 NGRNQ9NPE2 291 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 AGPAT3Q9NRZ7 376 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 HSPBP1Q9NZL4 362 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 PRG3Q9Y2Y8 225 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-208ENST00000578630 DERAQ9Y315 318 aa12.53□□□□□ -0.4
ERBB2-208ENST00000578630 MTCH2Q9Y6C9 303 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms