RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 HIBADHP31937 336 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ALDH1A3P47895 512 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MAN2A2P49641 1150 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 RABGGTBP53611 331 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CTXN1P60606 82 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ADAM17P78536 824 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CNGB1Q14028 1251 aaPredicted RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 R3HDM1Q15032 1099 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 LRRC41Q15345 812 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 VPS72Q15906 364 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 PGS1Q32NB8 556 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ATAT1Q5SQI0 421 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 AFMIDQ63HM1 303 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ANKS6Q68DC2 871 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 NAIF1Q69YI7 327 aaPredicted RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 EFCAB12Q6NXP0 572 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 DRICH1Q6PGQ1 229 aaPredicted RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 GADL1Q6ZQY3 521 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 SEM1Q6ZVN7 128 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 HTR3DQ70Z44 454 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CATIPQ7Z7H3 387 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 XYLT1Q86Y38 959 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 TPH2Q8IWU9 490 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ZGPATQ8N5A5 531 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MB21D1Q8N884 522 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 FBXO18Q8NFZ0 1043 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 OR52N2Q8NGI0 321 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ZFP28Q8NHY6 868 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 SLC35B2Q8TB61 432 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 IFI44Q8TCB0 444 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 TFAP2CQ92754 450 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 HPS3Q969F9 1004 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CLIP3Q96DZ5 547 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MVB12AQ96EY5 273 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 TMX3Q96JJ7 454 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CLPTM1LQ96KA5 538 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MRGPRX4Q96LA9 322 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MRI1Q9BV20 369 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 LSM14BQ9BX40 385 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 C1QTNF3Q9BXJ4 246 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 GPR87Q9BY21 358 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 CPEB1Q9BZB8 566 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 SLC12A5Q9H2X9 1139 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 SPON1Q9HCB6 807 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 NMRK2Q9NPI5 230 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 KMT5AQ9NQR1 393 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 MAN1C1Q9NR34 630 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 FAM30AQ9NZY2 134 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 NOB1Q9ULX3 412 aaKnown RBP2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 TSC22D4Q9Y3Q8 395 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 TESMINQ9Y4I5 508 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 PCDHB1Q9Y5F3 818 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 ACTL7AQ9Y615 435 aa2.88□□□□□ -1.95
PTP4A1-204ENST00000578299 KLRG2A4D1S0 409 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 GOLGA6CA6NDK9 693 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 GOLGA6BA6NDN3 693 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 WNT10BO00744 389 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 AP1G1O43747 822 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 PARNO95453 639 aaKnown RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 POMCP01189 267 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 AMHP03971 560 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 GOLGA6DP0CG33 693 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 ALAS1P13196 640 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 HK1P19367 917 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 FPR1P21462 350 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 LPOP22079 712 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 IL12RB1P42701 662 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 FXR1P51114 621 aaKnown RBP eCLIP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 SCNN1GP51170 649 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 DSC2Q02487 901 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 CREMQ03060 361 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 TLE1Q04724 770 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 CRHR2Q13324 411 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 MINDY4Q4G0A6 757 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 ATXN7L2Q5T6C5 722 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 C1QL3Q5VWW1 255 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 Q6ZRM9 215 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 EPM2AIP1Q7L775 607 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 PRRT2Q7Z6L0 340 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 PLXDC1Q8IUK5 500 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 FMNL3Q8IVF7 1028 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 GRAMD1CQ8IYS0 662 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 MYO1HQ8N1T3 1032 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 MAGEB6Q8N7X4 407 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 C3orf20Q8ND61 904 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 NLGN4YQ8NFZ3 816 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 OR10H5Q8NGA6 315 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 TSR2Q969E8 191 aaKnown RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 RGMAQ96B86 450 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 C1GALT1C1Q96EU7 318 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 LRGUKQ96M69 825 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 DMRTA2Q96SC8 542 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 MNTQ99583 582 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 KRTAP3-1Q9BYR8 98 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 C11orf54Q9H0W9 315 aaPredicted RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 GOLGA6AQ9NYA3 693 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 POGKQ9P215 609 aa2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 RUVBL1Q9Y265 456 aaKnown RBP2.87□□□□□ -1.95
PTP4A1-204ENST00000578299 B8ZZF3 427 aa2.86□□□□□ -1.95
PTP4A1-204ENST00000578299 C1QTNF3-AMACRE9PGA6 284 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms