RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PMS1P54277 932 aaKnown RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 EPHB1P54762 984 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 NOP14P78316 857 aaKnown RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 ZNF844Q08AG5 666 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 KPNB1Q14974 876 aaKnown RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 TAF1BQ53T94 588 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 BRINP3Q76B58 766 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 TMC3Q7Z5M5 1100 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 TEX2Q8IWB9 1127 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 CCNYQ8ND76 341 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 FBXO25Q8TCJ0 367 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 ZNF507Q8TCN5 953 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 ATXN2LQ8WWM7 1075 aaKnown RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 POLR3CQ9BUI4 534 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 SMYD3Q9H7B4 428 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 DCLRE1BQ9H816 532 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 A0A087X0B3 334 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 CFLARO15519 480 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 PPP4CP60510 307 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 FAM213AQ9BRX8 229 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 HSPBP1Q9NZL4 362 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 TRAF3IP3Q9Y228 551 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
PTPRM-205ENST00000577827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-205ENST00000577827 INO80B-WBP1J3KQ70 363 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 GZMAP12544 262 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PBX1P40424 430 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 ROR1Q01973 937 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 SPOPLQ6IQ16 392 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 RHPN2Q8IUC4 686 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 HIPK4Q8NE63 616 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 SLC26A7Q8TE54 656 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 NSL1Q96IY1 281 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 INO80BQ9C086 356 aaPredicted RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 FLT1P17948 1338 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 JCADQ9P266 1359 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 TBCCQ15814 346 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 RABGAP1LQ5R372 815 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PASD1Q8IV76 773 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 TTC39CQ8N584 583 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 TSEN2Q8NCE0 465 aaKnown RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 TTC16Q8NEE8 873 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 CEP70Q8NHQ1 597 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 HSPH1Q92598 858 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 RGL1Q9NZL6 768 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 FEM1BQ9UK73 627 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PCDHB2Q9Y5E7 798 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 KRT10P13645 584 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 ERVK-9P63128 1117 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 HDAC11Q96DB2 347 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 SMYD2Q9NRG4 433 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 SRP68Q9UHB9 627 aaKnown RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 MAGEA13PA6NCF6 341 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 E7ENQ6 273 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 ASNSP08243 561 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 STMN1P16949 149 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
PTPRM-205ENST00000577827 FAM196AQ6ZSG2 479 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 MTBPQ96DY7 904 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 SENP7Q9BQF6 1050 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 NDUFA13Q9P0J0 144 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 NYAP2Q9P242 653 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
PTPRM-205ENST00000577827 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 CRKP46108 304 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 KCNJ1P48048 391 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 TTMPQ5BVD1 217 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 C11orf63Q6NUN7 778 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 CRELD2Q6UXH1 353 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 ZNF571Q7Z3V5 609 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 CDKL3Q8IVW4 592 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 C4orf33Q8N1A6 199 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 FAM149B1Q96BN6 582 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 FRMD8Q9BZ67 464 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 THAP2Q9H0W7 228 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 NGRNQ9NPE2 291 aaKnown RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 UBOX5O94941 541 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 KLHL2O95198 593 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 MUTP22033 750 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 SERPINB9P50453 376 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-205ENST00000577827 KIAA0895Q8NCT3 520 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 BTBD6Q96KE9 485 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 KCNK16Q96T55 309 aa10.96□□□□□ -0.65
PTPRM-205ENST00000577827 DLGAP2Q9P1A6 1054 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms