RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CYP2C9P11712 490 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 CDC25BP30305 580 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 DNM2P50570 870 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 GOLGA8FQ08AF8 430 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 GOLGA8DPQ0D2H9 430 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TCEAL5Q5H9L2 206 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 FAM47CQ5HY64 1035 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 FOXR2Q6PJQ5 311 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 HS2ST1Q7LGA3 356 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 EXOC8Q8IYI6 725 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 KIAA0319LQ8IZA0 1049 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 C7orf31Q8N865 590 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 HVCN1Q96D96 273 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 SAAL1Q96ER3 474 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 ZBTB45Q96K62 511 aaPredicted RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 FDXACB1Q9BRP7 624 aaPredicted RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 NTPCRQ9BSD7 190 aaKnown RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TUBGCP2Q9BSJ2 902 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 KATNAL1Q9BW62 490 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TARS2Q9BW92 718 aaKnown RBP10.98□□□□□ -0.65
CRLF3-202ENST00000577725 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 EXOC7Q9UPT5 735 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 ATRXP46100 2492 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 CHD6Q8TD26 2715 aa10.98□□□□□ -0.65
CRLF3-202ENST00000577725 RIF1Q5UIP0 2472 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 LGALS16A8MUM7 142 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 H0YCG3 227 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 K7ERI5 159 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 KPNA6O60684 536 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 PRKCBP05771 671 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 EPB41P11171 864 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 HARSP12081 509 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 FGFR4P22455 802 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 RPL13P26373 211 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 TMOD1P28289 359 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 ADSSP30520 456 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 LTBRP36941 435 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 LIG4P49917 911 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 WDR5P61964 334 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 STRN3Q13033 797 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 SMAD4Q13485 552 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 TFDP1Q14186 410 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 MXD4Q14582 209 aaPredicted RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 NR1I3Q14994 352 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 FILIP1LQ4L180 1135 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 MIIPQ5JXC2 388 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 CDCA2Q69YH5 1023 aaPredicted RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 ARMCX5Q6P1M9 558 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 VSTM4Q8IW00 320 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 ZBTB8OSQ8IWT0 167 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 FAM186BQ8IYM0 893 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 RDH13Q8NBN7 331 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 MAP7D2Q96T17 732 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 CCDC113Q9H0I3 377 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 NSUN3Q9H649 340 aaKnown RBP10.97□□□□□ -0.65
CRLF3-202ENST00000577725 MINDY3Q9H8M7 445 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 DMAC2Q9NW81 257 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 HSPBP1Q9NZL4 362 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 PHLPP2Q6ZVD8 1323 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 NRCAMQ92823 1304 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 VPS13AQ96RL7 3174 aa10.97□□□□□ -0.65
CRLF3-202ENST00000577725 FAM186AA6NE01 2351 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 MBLAC1A4D2B0 266 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 INO80B-WBP1J3KQ70 363 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 HNRNPDLO14979 420 aaKnown RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 B4GALT5O43286 388 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 EXOC3O60645 756 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 GJB5O95377 273 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 ADRB2P07550 413 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 MATR3P43243 847 aaKnown RBP eCLIP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 KLK7P49862 253 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 PTENP60484 403 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 UBXN1Q04323 297 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 MBTD1Q05BQ5 628 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 ARID5BQ14865 1188 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 CLUL1Q15846 466 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 NFIL3Q16649 462 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 GDF6Q6KF10 455 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 RPAINQ86UA6 219 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 CDR2LQ86X02 465 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 CCDC155Q8N6L0 562 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 GOLGA5Q8TBA6 731 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 DNAJB3Q8WWF6 145 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 POMGNT1Q8WZA1 660 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 CTAGE1Q96RT6 745 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 INO80BQ9C086 356 aaPredicted RBP10.96□□□□□ -0.65
CRLF3-202ENST00000577725 HAPLN2Q9GZV7 340 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
CRLF3-202ENST00000577725 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms