RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 LIG1P18858 919 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 CYP11B2P19099 503 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 MCM7P33993 719 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 YARSP54577 528 aaKnown RBP15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 GNL2Q13823 731 aaKnown RBP15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 PADI6Q6TGC4 694 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 RSPO2Q6UXX9 243 aaPredicted RBP15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 C1orf210Q8IVY1 113 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 NSUN7Q8NE18 718 aaKnown RBP15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 PJA1Q8NG27 643 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 HASPINQ8TF76 798 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 RAB34Q9BZG1 259 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 GPRC5CQ9NQ84 441 aa15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 TOPORSQ9NS56 1045 aaPredicted RBP15.66■□□□□ 0.1
SMARCD2-205ENST00000577686 TMEM189-UBE2V1I3L0A0 370 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 NCAM2O15394 837 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 RPA1P27694 616 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 RAB33AQ14088 237 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 ANKS3Q6ZW76 656 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 CATSPER3Q86XQ3 398 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 LNX1Q8TBB1 728 aaPredicted RBP15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 SLC7A14Q8TBB6 771 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 RABGGTAQ92696 567 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 CLSTN3Q9BQT9 956 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 SLC38A7Q9NVC3 462 aa15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 NOL7Q9UMY1 257 aaKnown RBP15.65■□□□□ 0.1
SMARCD2-205ENST00000577686 PTGESO14684 152 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 CCL16O15467 120 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 B3GAT3O94766 335 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 DCNP07585 359 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 SPATA31C1P0DKV0 1188 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 ELF1P32519 619 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 FOSBP53539 338 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 STARD6P59095 220 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 MLF2Q15773 248 aaPredicted RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 ME3Q16798 604 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 PABPC1LQ4VXU2 614 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 NOSTRINQ8IVI9 506 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 DDX27Q96GQ7 796 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 OSBPL6Q9BZF3 934 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 MTRRQ9UBK8 725 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 MRPS17Q9Y2R5 130 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
SMARCD2-205ENST00000577686 KANSL1LA0AUZ9 987 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 LAMTOR5O43504 91 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 MED24O75448 989 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 LRG1P02750 347 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 SP9P0CG40 484 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 OR1D2P34982 312 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 ATF7IP2Q5U623 682 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 POTEGQ6S5H5 508 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 RUBCNQ92622 972 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 FGF13Q92913 245 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 SECISBP2LQ93073 1101 aaKnown RBP15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 NELL2Q99435 816 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 PAAF1Q9BRP4 392 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 GDE1Q9NZC3 331 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 MRPS23Q9Y3D9 190 aaKnown RBP15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 BACE2Q9Y5Z0 518 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 R4GN57 208 aa15.63■□□□□ 0.09
SMARCD2-205ENST00000577686 K7ERI5 159 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 SPTLC1O15269 473 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 FGFR3P22607 806 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 CCT6AP40227 531 aaKnown RBP15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 TRAPPC10P48553 1259 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 NEK4P51957 841 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 GPC5P78333 572 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 UBXN2BQ14CS0 331 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 ZNF528Q3MIS6 628 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 PARM1Q6UWI2 310 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 FGF14Q92915 247 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 CCDC113Q9H0I3 377 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 TMEM60Q9H2L4 133 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 FOXP1Q9H334 677 aaPredicted RBP15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 SPATA6Q9NWH7 488 aaPredicted RBP15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 FBXO4Q9UKT5 387 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 CDY1Q9Y6F8 540 aa15.62■□□□□ 0.09
SMARCD2-205ENST00000577686 PTPRZ1P23471 2315 aaPredicted RBP15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 A0A087WWV3 80 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 H7C4K7 107 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 PRRG1O14668 218 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 ZNF197O14709 1029 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 JAK2O60674 1132 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 NTHL1P78549 312 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 SNW1Q13573 536 aaKnown RBP15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 SLC44A4Q53GD3 710 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 ELMOD1Q8N336 334 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 GPR161Q8N6U8 529 aaKnown RBP15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 FOXQ1Q9C009 403 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 DLGAP2Q9P1A6 1054 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 CACNG4Q9UBN1 327 aa15.61■□□□□ 0.09
SMARCD2-205ENST00000577686 KCNG1Q9UIX4 513 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms