RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 CLTCL1P53675 1640 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAST1Q9Y2H9 1570 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 COPS2P61201 443 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 USP4Q13107 963 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MFSD14CQ5VZR4 134 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAPKAPK5Q8IW41 473 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 CCDC28BQ9BUN5 200 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAGEB5Q9BZ81 275 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 USP40Q9NVE5 1235 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ARF3P61204 181 aaPredicted RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 AP2B1P63010 937 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ARF1P84077 181 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 GRAMD1BQ3KR37 738 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TEKT3Q9BXF9 490 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TRIM13O60858 407 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 NPTXRO95502 500 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 IRF1P10914 325 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 SCNN1DP51172 638 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ELAC2Q9BQ52 826 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 RNPEPQ9H4A4 650 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 KRCC1Q9NPI7 259 aaPredicted RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 DNAJC17Q9NVM6 304 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 KDM3AQ9Y4C1 1321 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 GHRP10912 638 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ABRQ12979 859 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TUBA3CQ13748 450 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ZMYND11Q15326 602 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TAF13Q15543 124 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 RERGLQ9H628 205 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 CDC42BPAQ5VT25 1732 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 IGFBP4P22692 258 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ADARP55265 1226 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 RPS7P62081 194 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 ELF3P78545 371 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 PPP4R3CPQ6ZMV5 832 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 OR6B3Q8NGW1 331 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 FAF2Q96CS3 445 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 SPATA7Q9P0W8 599 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 KLHL8Q9P2G9 620 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 RABL2AQ9UBK7 228 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 F5H423 210 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 GTPBP6O43824 516 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 NDUFA8P51970 172 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 RIPK1Q13546 671 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 IRGCQ6NXR0 463 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 SH2D3CQ8N5H7 860 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 KCNS3Q9BQ31 491 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 DDX50Q9BQ39 737 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 PTCH1Q13635 1447 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 TAF4O00268 1085 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 FEN1P39748 380 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 TSPAN14Q8NG11 270 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CLCC1Q96S66 551 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CNPPD1Q9BV87 410 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 DNAJC11Q9NVH1 559 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 USP21Q9UK80 565 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 PNMA8BQ9ULN7 279 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 RHOBTB1O94844 696 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ANXA1P04083 346 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 GJA1P17302 382 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 TNFAIP2Q03169 654 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 SMU1Q2TAY7 513 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 C2CD5Q86YS7 1000 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 REXO1Q8N1G1 1221 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 PRPF18Q99633 342 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 FBXO9Q9UK97 447 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 MBD4O95243 580 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 MYBP10242 640 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ALOX15P16050 662 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 EIF2B2P49770 351 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 GTF2IP78347 998 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 PAK1Q13153 545 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 GLYCTKQ8IVS8 523 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 FAM133AQ8N9E0 248 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 USP15Q9Y4E8 981 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 TRAPPC8Q9Y2L5 1435 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 SPTLC1O15269 473 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ATP1A3P13637 1013 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CD58P19256 250 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 BCAMP50895 628 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 NEK10Q6ZWH5 1172 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 FAR1Q8WVX9 515 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms