RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TBR1Q16650 682 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 ARHGAP29Q52LW3 1261 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 EFCAB12Q6NXP0 572 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 SPATA31D4Q6ZUB0 917 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 NOL8Q76FK4 1167 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 CATIPQ7Z7H3 387 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 DAAM2Q86T65 1068 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 GRAMD1CQ8IYS0 662 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 TRMT2AQ8IZ69 625 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 D2HGDHQ8N465 521 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 MSL3Q8N5Y2 521 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 MDGA1Q8NFP4 955 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 NSUN6Q8TEA1 469 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 ST8SIA2Q92186 375 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 EDAQ92838 391 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 CLPTM1LQ96KA5 538 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 ZNF512Q96ME7 567 aaPredicted RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 PTPN18Q99952 460 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 DPYSL5Q9BPU6 564 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 POLR3GLQ9BT43 218 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 ENKD1Q9H0I2 346 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 MEGF9Q9H1U4 602 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 SLC12A5Q9H2X9 1139 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 RLIMQ9NVW2 624 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 PPP4R1LQ9P1A2 415 aa3.22□□□□□ -1.89
COPS3-213ENST00000577210 FEZ2Q9UHY8 353 aaPredicted RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 ZFR2Q9UPR6 939 aaKnown RBP3.22□□□□□ -1.89
COPS3-213ENST00000577210 TBKBP1A7MCY6 615 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 PATE3B3GLJ2 98 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 MATN2O00339 956 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 RECQL4O94761 1208 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 POMCP01189 267 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 FTLP02792 175 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 HRGP04196 525 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 ALOX15P16050 662 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 HK3P52790 923 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 GBX1Q14549 363 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 ELAVL1Q15717 326 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 PABPC1LQ4VXU2 614 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 DACT2Q5SW24 774 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 PRAMEF14Q5SWL7 426 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 TCTN3Q6NUS6 607 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 ARMC6Q6NXE6 501 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 Q6ZVL8 140 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 SEM1Q6ZVN7 128 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 EPM2AIP1Q7L775 607 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 PRRT2Q7Z6L0 340 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 DGKHQ86XP1 1220 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 TPH2Q8IWU9 490 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 GPR135Q8IZ08 494 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 TTC8Q8TAM2 541 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 MDM1Q8TC05 714 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 CCHCR1Q8TD31 782 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 DIS3LQ8TF46 1054 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 DDX17Q92841 729 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 TMX3Q96JJ7 454 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 DCLRE1CQ96SD1 692 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 CPPED1Q9BRF8 314 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 CHMP4AQ9BY43 222 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 GTPBP4Q9BZE4 634 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 C11orf54Q9H0W9 315 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 TMEM60Q9H2L4 133 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 DEF6Q9H4E7 631 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 SARS2Q9NP81 518 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 DMRT3Q9NQL9 472 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 CFAP97Q9P2B7 532 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 AJAP1Q9UKB5 411 aaPredicted RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 NOB1Q9ULX3 412 aaKnown RBP3.21□□□□□ -1.9
COPS3-213ENST00000577210 LIMCH1Q9UPQ0 1083 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 STXBP5LQ9Y2K9 1186 aa3.21□□□□□ -1.9
COPS3-213ENST00000577210 CAPN14A8MX76 684 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 FOXN3O00409 490 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 ZNF623O75123 536 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 MYL1P05976 194 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 RAP2AP10114 183 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PHKG2P15735 406 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 MSX2P35548 267 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 MAN2A2P49641 1150 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 SELENOPP49908 381 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 FAM193AP78312 1265 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PURAQ00577 322 aaKnown RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 PLP2Q04941 152 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 NOGQ13253 232 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 MTM1Q13496 603 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 HDAC1Q13547 482 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 CNGB1Q14028 1251 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 FGL2Q14314 439 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 SEPT2Q15019 361 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PRKD1Q15139 912 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 BMT2Q1RMZ1 405 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 ANO6Q4KMQ2 910 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 NAIF1Q69YI7 327 aaPredicted RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 SGMS1Q86VZ5 419 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PDSS2Q86YH6 399 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PLXDC1Q8IUK5 500 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 FUKQ8N0W3 1084 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 FAM43AQ8N2R8 423 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 DNERQ8NFT8 737 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 BRIX1Q8TDN6 353 aaKnown RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 TFAP2CQ92754 450 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms