RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ZNF500O60304 480 aaPredicted RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 AMHP03971 560 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 CXCL8P10145 99 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 KCNJ6P48051 423 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 YARSP54577 528 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 DEFB103AP81534 67 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 CYP24A1Q07973 514 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 SLC10A6Q3KNW5 377 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 LUZP1Q86V48 1076 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 GAS2L3Q86XJ1 694 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 IRF2BP1Q8IU81 584 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 NPAS4Q8IUM7 802 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 BRSK2Q8IWQ3 736 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 FAM186BQ8IYM0 893 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 MFSD14AQ96MC6 490 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 GDF15Q99988 308 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 CXCL16Q9H2A7 254 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 RPF1Q9H9Y2 349 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 TOPORSQ9NS56 1045 aaPredicted RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 SAMSN1Q9NSI8 373 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 FANCLQ9NW38 375 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 TTC26A0AVF1 554 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 BECN2A8MW95 431 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 LACTBL1A8MY62 500 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 UPP2O95045 317 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 IL18RAPO95256 599 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 GNA14O95837 355 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 FGFR1P11362 822 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 MSNP26038 577 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 MLH1P40692 756 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 WNT7BP56706 349 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 POU5F1Q01860 360 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 PPP2R3AQ06190 1150 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 DMTNQ08495 405 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 PSMD6Q15008 389 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 SHHQ15465 462 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 CCDC40Q4G0X9 1142 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 CLLU1OSQ5K130 101 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 C9orf50Q5SZB4 431 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 RASIP1Q5U651 963 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 CDKAL1Q5VV42 579 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 ALKAL1Q6UXT8 129 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 TMCO2Q7Z6W1 182 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 RNF214Q8ND24 703 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 GSTCDQ8NEC7 633 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 HELQQ8TDG4 1101 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 TOP1MTQ969P6 601 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 CCDC127Q96BQ5 260 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 BORCS6Q96GS4 357 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 SNX27Q96L92 541 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 CNOT6LQ96LI5 555 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 ZFP42Q96MM3 310 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 GAD1Q99259 594 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 HSD3B7Q9H2F3 369 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 MTIF3Q9H2K0 278 aaKnown RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 RSAD1Q9HA92 442 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 PLEKHA5Q9HAU0 1116 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 UBN1Q9NPG3 1134 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 RNF19AQ9NV58 838 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 ARMCX3Q9UH62 379 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-213ENST00000576407 GIT1Q9Y2X7 761 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 SLC4A7Q9Y6M7 1214 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 TTC3P53804 2025 aa9.27□□□□□ -0.93
PRPF8-213ENST00000576407 SMIM28A0A1B0GU29 152 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 KCNJ18B7U540 433 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 PTGESO14684 152 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 INPPL1O15357 1258 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 HOXA2O43364 376 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 DGKIO75912 1065 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 DLATP10515 647 aaKnown RBP9.26□□□□□ -0.93
PRPF8-213ENST00000576407 KRT13P13646 458 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 ZNF18P17022 549 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 GATMP50440 423 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 VAMP7P51809 220 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 MCCD1P59942 119 aaPredicted RBP9.26□□□□□ -0.93
PRPF8-213ENST00000576407 FAM193AP78312 1265 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 DLG4P78352 724 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 SPAG1Q07617 926 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 BFSP1Q12934 665 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 KCNJ12Q14500 433 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 XKR4Q5GH76 650 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 TCP11X2Q5H9J9 407 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 GLRA4Q5JXX5 417 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 FAM117BQ6P1L5 589 aa9.26□□□□□ -0.93
PRPF8-213ENST00000576407 GLB1LQ6UWU2 654 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms