RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SOD2P04179 222 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 CLTAP09496 248 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 NAB2Q15742 525 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.67■■□□□ 1.7
SNF8-217ENST00000576353 CHAMP1Q96JM3 812 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 SNX27Q96L92 541 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 PPP1R10Q96QC0 940 aaKnown RBP25.67■■□□□ 1.7
SNF8-217ENST00000576353 COL25A1Q9BXS0 654 aaPredicted RBP25.67■■□□□ 1.7
SNF8-217ENST00000576353 TRIM9Q9C026 710 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 MRPL17Q9NRX2 175 aaKnown RBP25.67■■□□□ 1.7
SNF8-217ENST00000576353 SLC38A7Q9NVC3 462 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 ADAM28Q9UKQ2 775 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 EXOC7Q9UPT5 735 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 FAM50BQ9Y247 325 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 PCDHB13Q9Y5F0 798 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 DLL1O00548 723 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 CMA1P23946 247 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 DLX2Q07687 328 aaPredicted RBP25.66■■□□□ 1.7
SNF8-217ENST00000576353 ALCAMQ13740 583 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 GLRA4Q5JXX5 417 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 SLFN12LQ6IEE8 588 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 CNNM4Q6P4Q7 775 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 ADAMTS19Q8TE59 1207 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 AUTS2Q8WXX7 1259 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 UROC1Q96N76 676 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 HERC2P3Q9BVR0 1158 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 STRA6Q9BX79 667 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 TBC1D7Q9P0N9 293 aa25.66■■□□□ 1.7
SNF8-217ENST00000576353 TBX10O75333 385 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 EFEMP2O95967 443 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 URODP06132 367 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 KCNE1P15382 129 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 PTPN14Q15678 1187 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 PTCRAQ6ISU1 281 aaPredicted RBP25.65■■□□□ 1.7
SNF8-217ENST00000576353 RNF168Q8IYW5 571 aaPredicted RBP25.65■■□□□ 1.7
SNF8-217ENST00000576353 CEP57L1Q8IYX8 460 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 RABGGTAQ92696 567 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 ACCSQ96QU6 501 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 C7orf25Q9BPX7 421 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 PAAF1Q9BRP4 392 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 EMILIN2Q9BXX0 1053 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 HAPLN2Q9GZV7 340 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 PLEKHA5Q9HAU0 1116 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 CNTN3Q9P232 1028 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 BRWD1Q9NSI6 2320 aa25.65■■□□□ 1.7
SNF8-217ENST00000576353 A0A0B4J269 797 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 F8W810 466 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 OGTO15294 1046 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 CLASP2O75122 1294 aaKnown RBP25.64■■□□□ 1.7
SNF8-217ENST00000576353 PPP1R37O75864 691 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 GCNT3O95395 438 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 GLP2RO95838 553 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 ASIC1P78348 528 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 SLC10A6Q3KNW5 377 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 SEZ6Q53EL9 994 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 KIAA1841Q6NSI8 718 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 FUT10Q6P4F1 479 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 TMEM184AQ6ZMB5 413 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 MSTO1Q9BUK6 570 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 CLEC1BQ9P126 229 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 CD207Q9UJ71 328 aa25.64■■□□□ 1.7
SNF8-217ENST00000576353 SF3B1O75533 1304 aaKnown RBP eCLIP25.63■■□□□ 1.69
SNF8-217ENST00000576353 ATG2AQ2TAZ0 1938 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 GRXCR2A6NFK2 248 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 GLUD2P49448 558 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 KCNC3Q14003 757 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 USP41Q3LFD5 358 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 L1TD1Q5T7N2 865 aaKnown RBP25.63■■□□□ 1.69
SNF8-217ENST00000576353 DCLRE1AQ6PJP8 1040 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 STXBP4Q6ZWJ1 553 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 TAS1R1Q7RTX1 841 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 VN1R2Q8NFZ6 395 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 DDX27Q96GQ7 796 aaKnown RBP25.63■■□□□ 1.69
SNF8-217ENST00000576353 MSLNLQ96KJ4 702 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 CACNG4Q9UBN1 327 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 USP25Q9UHP3 1055 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 BARX2Q9UMQ3 279 aaPredicted RBP25.63■■□□□ 1.69
SNF8-217ENST00000576353 STYXL1Q9Y6J8 313 aa25.63■■□□□ 1.69
SNF8-217ENST00000576353 ANKRD63C9JTQ0 380 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 LILRB3O75022 631 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 SLFN14P0C7P3 912 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 PFKFB1P16118 471 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 DSG1Q02413 1049 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 ELAVL2Q12926 359 aaKnown RBP25.62■■□□□ 1.69
SNF8-217ENST00000576353 COASYQ13057 564 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 POSTNQ15063 836 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 LLGL2Q6P1M3 1020 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 SLC39A4Q6P5W5 647 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 PPFIBP1Q86W92 1011 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 GPR65Q8IYL9 337 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 CASP10Q92851 521 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 ZMAT2Q96NC0 199 aaKnown RBP25.62■■□□□ 1.69
SNF8-217ENST00000576353 GPR62Q9BZJ7 368 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 CHST7Q9NS84 486 aa25.62■■□□□ 1.69
SNF8-217ENST00000576353 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.62■■□□□ 1.69
SNF8-217ENST00000576353 TDRD15B5MCY1 1934 aaKnown RBP25.61■■□□□ 1.69
SNF8-217ENST00000576353 A0A1B0GVL5 298 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 C2CD2LO14523 706 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 B3GAT3O94766 335 aa25.61■■□□□ 1.69
SNF8-217ENST00000576353 KIF4AO95239 1232 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms