RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PLCG1P19174 1290 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 PROZP22891 400 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 MARCKSP29966 332 aaPredicted RBP28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 YARSP54577 528 aaKnown RBP28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 MCM6Q14566 821 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 PTPAQ15257 358 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 SPECC1Q5M775 1068 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 RTP2Q5QGT7 225 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 GPR149Q86SP6 731 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 PALB2Q86YC2 1186 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 PPP1R10Q96QC0 940 aaKnown RBP28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 REEP2Q9BRK0 252 aa28.56■■■□□ 2.16
NPLOC4-215ENST00000574095 C2CD4DB7Z1M9 353 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 ABLIM1O14639 778 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 GLUD1P00367 558 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 SPATA31D3P0C874 917 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 MCF2P10911 925 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 HARSP12081 509 aaKnown RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 RPL17P18621 184 aaKnown RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 IGFBP6P24592 240 aaPredicted RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 CEBPZQ03701 1054 aaKnown RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 FAM171A1Q5VUB5 890 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 PRSS55Q6UWB4 352 aaPredicted RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 MPZL3Q6UWV2 235 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 SPATA31D4Q6ZUB0 917 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 LARSQ9P2J5 1176 aaKnown RBP28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 C2orf16Q68DN1 1984 aa28.55■■■□□ 2.16
NPLOC4-215ENST00000574095 SMIM28A0A1B0GU29 152 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 ZXDAP98168 799 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 ALKAL1Q6UXT8 129 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 USP49Q70CQ1 688 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 CEP57Q86XR8 500 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 GPR65Q8IYL9 337 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 RAD54LQ92698 747 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 EPSTI1Q96J88 318 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 ACAP3Q96P50 834 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 GOLGA2P5Q9HBQ8 144 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 TOPORSQ9NS56 1045 aaPredicted RBP28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 FNIP2Q9P278 1114 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 MTMR6Q9Y217 621 aa28.54■■■□□ 2.16
NPLOC4-215ENST00000574095 MTCL1Q9Y4B5 1905 aaKnown RBP28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 CLCNKBP51801 687 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 TTPALQ9BTX7 342 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 CCSER1Q9C0I3 900 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 ANKFY1Q9P2R3 1169 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 FBXO2Q9UK22 296 aaPredicted RBP28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 ODF2LQ9ULJ1 636 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 CITO14578 2027 aa28.53■■■□□ 2.16
NPLOC4-215ENST00000574095 MYO10Q9HD67 2058 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 TOM1L1O75674 476 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 BRD1O95696 1058 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 NCKAP1LP55160 1127 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 SEZ6Q53EL9 994 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 XKR4Q5GH76 650 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 HAUS6Q7Z4H7 955 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 MYCT1Q8N699 235 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 ZMAT2Q96NC0 199 aaKnown RBP28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 HCN4Q9Y3Q4 1203 aa28.52■■■□□ 2.16
NPLOC4-215ENST00000574095 VWA8A3KMH1 1905 aa28.51■■■□□ 2.16
NPLOC4-215ENST00000574095 TECTAO75443 2155 aa28.51■■■□□ 2.16
NPLOC4-215ENST00000574095 DENND4AQ7Z401 1863 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 CCDC195A0A1B0GUA6 201 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 TGM5O43548 720 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 RFPL2O75678 378 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 B3GAT3O94766 335 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 FAM13AO94988 1023 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 KRT18P05783 430 aaKnown RBP28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 SOX4Q06945 474 aaPredicted RBP28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 PTPN21Q16825 1174 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 DCLRE1AQ6PJP8 1040 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 TRIM67Q6ZTA4 783 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 HFE2Q6ZVN8 426 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 LNX1Q8TBB1 728 aaPredicted RBP28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 SNX27Q96L92 541 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 CLIC6Q96NY7 704 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 DPP7Q9UHL4 492 aa28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 SRPRBQ9Y5M8 271 aaKnown RBP28.51■■■□□ 2.15
NPLOC4-215ENST00000574095 STX6O43752 255 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 CREMQ03060 361 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 ELAVL2Q12926 359 aaKnown RBP28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 NOLC1Q14978 699 aaKnown RBP eCLIP28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 PSMD5Q16401 504 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 UPP1Q16831 310 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 LILRA6Q6PI73 481 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 ELMSAN1Q6PJG2 1045 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 CD300LGQ6UXG3 332 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 ZPBP2Q6X784 338 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 C15orf39Q6ZRI6 1047 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 CMASQ8NFW8 434 aaPredicted RBP28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 PIK3R5Q8WYR1 880 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 LARP4BQ92615 738 aaKnown RBP28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 UROC1Q96N76 676 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 ZHX3Q9H4I2 956 aa28.5■■■□□ 2.15
NPLOC4-215ENST00000574095 H0YCG3 227 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 TMEM189-UBE2V1I3L0A0 370 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 CLDN3O15551 220 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 MEFVO15553 781 aaPredicted RBP28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 DDIT3P35638 169 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 MATR3P43243 847 aaKnown RBP eCLIP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms