RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 ZDHHC7Q9NXF8 308 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 TNFSF13BQ9Y275 285 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 PHLPP2Q6ZVD8 1323 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 H3BQV1 296 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 N4BP1O75113 896 aaKnown RBP23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 C1RP00736 705 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 ELAVL2Q12926 359 aaKnown RBP23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 ZNF568Q3ZCX4 644 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 RINT1Q6NUQ1 792 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 LILRA6Q6PI73 481 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 KCNK18Q7Z418 384 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 DAW1Q8N136 415 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 PIK3R5Q8WYR1 880 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 DRC1Q96MC2 740 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 RHOBTB2Q9BYZ6 727 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 KMT5AQ9NQR1 393 aa23.22■■□□□ 1.31
CHRNB1-206ENST00000574054 GJB2P29033 226 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 YARSP54577 528 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 OSTNP61366 133 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 LIN9Q5TKA1 542 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 PPP1R10Q96QC0 940 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 MYADMQ96S97 322 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 ACO2Q99798 780 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 CCDC94Q9BW85 323 aaPredicted RBP23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 MRPL4Q9BYD3 311 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 PRKD2Q9BZL6 878 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 FBXL21Q9UKT6 434 aa23.21■■□□□ 1.31
CHRNB1-206ENST00000574054 B3GAT3O94766 335 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 ATP2C1P98194 919 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 RAD51AP2Q09MP3 1159 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 ASTLQ6HA08 431 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 C1orf186Q6ZWK4 172 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 GET4Q7L5D6 327 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 CEP120Q8N960 986 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 LNX1Q8TBB1 728 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 PLIN2Q99541 437 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 CLSTN3Q9BQT9 956 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 TARS2Q9BW92 718 aaKnown RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 CDT1Q9H211 546 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 TMEM134Q9H6X4 195 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 TOPORSQ9NS56 1045 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 FAM86C1Q9NVL1 165 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 IGSF9Q9P2J2 1179 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 ARHGAP28Q9P2N2 729 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 DUSP12Q9UNI6 340 aa23.2■■□□□ 1.3
CHRNB1-206ENST00000574054 VWA3AA6NCI4 1184 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 SFI1A8K8P3 1242 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 ZMYND10O75800 440 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 HARSP12081 509 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 GRM5P41594 1212 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 MAPK7Q13164 816 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 PDXDC1Q6P996 788 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 TAS1R3Q7RTX0 852 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 TMEM105Q8N8V8 129 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 FLCNQ8NFG4 579 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 RSAD2Q8WXG1 361 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 CDK5RAP3Q96JB5 506 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 TCHPQ9BT92 498 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 GOLGA2P5Q9HBQ8 144 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 EPS15L1Q9UBC2 864 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 DAXXQ9UER7 740 aaPredicted RBP23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 FBXW11Q9UKB1 542 aa23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 RBM19Q9Y4C8 960 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-206ENST00000574054 SLC16A4O15374 487 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 ADAM12O43184 909 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 CLCNKBP51801 687 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 DCLRE1AQ6PJP8 1040 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 ATOH1Q92858 354 aaPredicted RBP23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 UROC1Q96N76 676 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 TIPINQ9BVW5 301 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 SMC3Q9UQE7 1217 aa23.18■■□□□ 1.3
CHRNB1-206ENST00000574054 ZFHX2Q9C0A1 2572 aaPredicted RBP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 SMIM28A0A1B0GU29 152 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 TMEM189-UBE2V1I3L0A0 370 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 GALR2O43603 387 aaPredicted RBP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 NARSO43776 548 aaKnown RBP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 PAPLNO95428 1278 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 IGFBP6P24592 240 aaPredicted RBP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 GUCY2CP25092 1073 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 PPM1LQ5SGD2 360 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 PNMA5Q96PV4 448 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 IRF2BPLQ9H1B7 796 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 C17orf75Q9HAS0 396 aa23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 MTCL1Q9Y4B5 1905 aaKnown RBP23.17■■□□□ 1.3
CHRNB1-206ENST00000574054 H0Y858 1186 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 C8AP07357 584 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 MCF2P10911 925 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 FGFR3P22607 806 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 FSHRP23945 695 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 OR1D2P34982 312 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 NUBP1P53384 320 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 STRN3Q13033 797 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 GRASPQ7Z6J2 395 aaPredicted RBP23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 SIX5Q8N196 739 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 PTPRHQ9HD43 1115 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms