RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 PAAF1Q9BRP4 392 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 RAB34Q9BZG1 259 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
CCDC40-210ENST00000573903 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 PTGESO14684 152 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 PI15O43692 258 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 C8AP07357 584 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 CCT6AP40227 531 aaKnown RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 GRASPQ7Z6J2 395 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 GPR152Q8TDT2 470 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 BSNDQ8WZ55 320 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 CCDC113Q9H0I3 377 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 TBC1D17Q9HA65 648 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 ARHGEF3Q9NR81 526 aa13.42□□□□□ -0.26
CCDC40-210ENST00000573903 SH2B1Q9NRF2 756 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-210ENST00000573903 KRBA1A5PL33 1030 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 HOXA9P31269 272 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 TRAPPC10P48553 1259 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
CCDC40-210ENST00000573903 HTR4Q13639 388 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 ATF7IP2Q5U623 682 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 MTSS1LQ765P7 747 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 LNX1Q8TBB1 728 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-210ENST00000573903 UROC1Q96N76 676 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 BHMT2Q9H2M3 363 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 TOPORSQ9NS56 1045 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-210ENST00000573903 LRWD1Q9UFC0 647 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 CDH7Q9ULB5 785 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
CCDC40-210ENST00000573903 PHLPP2Q6ZVD8 1323 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 ANHXE9PGG2 379 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 K7ERI5 159 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 CCL16O15467 120 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 B3GAT3O94766 335 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC40-210ENST00000573903 ST3GAL1Q11201 340 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 EEF1DP3Q658K8 133 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 SLC7A14Q8TBB6 771 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 SNX29Q8TEQ0 813 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 SHDQ96IW2 340 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 KIFC3Q9BVG8 833 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-210ENST00000573903 BACH2Q9BYV9 841 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 SLC2A4RGQ9NR83 387 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 VWA8A3KMH1 1905 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 USP34Q70CQ2 3546 aa13.4□□□□□ -0.26
CCDC40-210ENST00000573903 CCDC169A6NNP5 214 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 OR1D2P34982 312 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-210ENST00000573903 NAB2Q15742 525 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 ZNF568Q3ZCX4 644 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 SPECC1Q5M775 1068 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-210ENST00000573903 ZC3H14Q6PJT7 736 aaKnown RBP13.39□□□□□ -0.27
CCDC40-210ENST00000573903 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 SNX27Q96L92 541 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 SEMA4AQ9H3S1 761 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
CCDC40-210ENST00000573903 SLC38A7Q9NVC3 462 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 MTRRQ9UBK8 725 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 KIAA1024Q9UPX6 916 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 USP20Q9Y2K6 914 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
CCDC40-210ENST00000573903 EDN1P05305 212 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 POU2F2P09086 479 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 FGFR3P22607 806 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 MCM2P49736 904 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 CLCNKBP51801 687 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 NTHL1P78549 312 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 RAB33AQ14088 237 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
CCDC40-210ENST00000573903 KRT79Q5XKE5 535 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 RTL10Q7L3V2 364 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 FGF13Q92913 245 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
CCDC40-210ENST00000573903 PPP1R10Q96QC0 940 aaKnown RBP13.38□□□□□ -0.27
CCDC40-210ENST00000573903 MRPL4Q9BYD3 311 aaKnown RBP13.38□□□□□ -0.27
CCDC40-210ENST00000573903 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms