RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 TUSC3Q13454 348 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 CTTNQ14247 550 aaKnown RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 GRM2Q14416 872 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 NTRK3Q16288 839 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 TMEM132AQ24JP5 1023 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 LAIR1Q6GTX8 287 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 NELL1Q92832 810 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 FAM126AQ9BYI3 521 aaPredicted RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 RALYQ9UKM9 306 aaKnown RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 VWA8A3KMH1 1905 aa13.52□□□□□ -0.24
PRPF8-208ENST00000573716 SLC30A4O14863 429 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 ECI2O75521 394 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 CAPSQ13938 189 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 TANGO2Q6ICL3 276 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 TPH2Q8IWU9 490 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 C4orf19Q8IY42 314 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 ASAP3Q8TDY4 903 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 KCNH3Q9ULD8 1083 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 NID2Q14112 1375 aa13.52□□□□□ -0.25
PRPF8-208ENST00000573716 TICRRQ7Z2Z1 1910 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 RHOP08100 348 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 CEBPBP17676 345 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
PRPF8-208ENST00000573716 EPHA7Q15375 998 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 AMHR2Q16671 573 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 KRT25Q7Z3Z0 450 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.51□□□□□ -0.25
PRPF8-208ENST00000573716 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
PRPF8-208ENST00000573716 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 ZSWIM4Q9H7M6 989 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 SEMA4GQ9NTN9 838 aa13.51□□□□□ -0.25
PRPF8-208ENST00000573716 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 GDF9O60383 454 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
PRPF8-208ENST00000573716 THP07101 528 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 RETP07949 1114 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 DMWDQ09019 674 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
PRPF8-208ENST00000573716 FZD5Q13467 585 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 RAB33AQ14088 237 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 UVSSAQ2YD98 709 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 PRR23CQ6ZRP0 262 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 POLR3FQ9H1D9 316 aaPredicted RBP13.5□□□□□ -0.25
PRPF8-208ENST00000573716 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 KCNMB3Q9NPA1 279 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
PRPF8-208ENST00000573716 CHURC1-FNTBB4DL54 471 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 PRRG1O14668 218 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 CPLX1O14810 134 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 LRG1P02750 347 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 LIG1P18858 919 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 GLRA2P23416 452 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 RPS6KB1P23443 525 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 FNTBP49356 437 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 CCR3P51677 355 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 SRSF5Q13243 272 aaKnown RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 HEATR6Q6AI08 1181 aaKnown RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 IL31Q6EBC2 164 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 MAEAQ7L5Y9 396 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 DNASE1L2Q92874 299 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 ELSPBP1Q96BH3 223 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 CORO1BQ9BR76 489 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
PRPF8-208ENST00000573716 CXCL16Q9H2A7 254 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 SNTG2Q9NY99 539 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 KCNJ14Q9UNX9 436 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 F5P12259 2224 aa13.49□□□□□ -0.25
PRPF8-208ENST00000573716 ZMYM2Q9UBW7 1377 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 SHISA7A6NL88 538 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 I3L4J1 428 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 M0R2N6 131 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms