RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ZWILCHQ9H900 591 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 GH2P01242 217 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 FCER1AP12319 257 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 PMLP29590 882 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 TCP11X1B4DZS4 312 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 APBA3O96018 575 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZNF18P17022 549 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 CA8P35219 290 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 ARSEP51690 589 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 MCL1Q07820 350 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 GRAMD4Q6IC98 578 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 PPM1NQ8N819 430 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 APOL1O14791 398 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 GDF11O95390 407 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 LRRC8BQ6P9F7 803 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 THEM5Q8N1Q8 247 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 TNIP3Q96KP6 325 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 SMYD2Q9NRG4 433 aa13.08□□□□□ -0.32
PCDHGA9-201ENST00000573521 ESYT3A0FGR9 886 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 TOMM70O94826 608 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 IL18RAPO95256 599 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 TDP2O95551 362 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 SNRPAP09012 282 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 SGSM1Q2NKQ1 1148 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CXorf56Q9H5V9 222 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CDY2AQ9Y6F7 541 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CDY1Q9Y6F8 540 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 ESRRBO95718 433 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CYP2C8P10632 490 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 SAT1P21673 171 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 EEF1B2P24534 225 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CNTFP26441 200 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 STK4Q13043 487 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 FBXO33Q7Z6M2 555 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 DDI1Q8WTU0 396 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZMAT2Q96NC0 199 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 MYMKA6NI61 221 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 NVLO15381 856 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 RAD51CO43502 376 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 TRPA1O75762 1119 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CD58P19256 250 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CASP1P29466 404 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 MAPK7Q13164 816 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CIAPIN1Q6FI81 312 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 XAB2Q9HCS7 855 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
PCDHGA9-201ENST00000573521 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 TMEM247A6NEH6 219 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 HUS1O60921 280 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 CYP2D6P10635 497 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 EIF2AK2P19525 551 aaKnown RBP13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 PSMD7P51665 324 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 KBTBD12Q3ZCT8 623 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 TERB1Q8NA31 727 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 C18orf8Q96DM3 657 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 SIKE1Q9BRV8 207 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 TMCC1O94876 653 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 TYK2P29597 1187 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 VHLP40337 213 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 ACADSBP45954 432 aa13.06□□□□□ -0.32
PCDHGA9-201ENST00000573521 MRPS25P82663 173 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms