RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RAB1AP62820 205 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 FMO1Q01740 532 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SATB1Q01826 763 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 EPS8Q12929 822 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 STK4Q13043 487 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC12A1Q13621 1099 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SEC23AQ15436 765 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TARBP2Q15633 366 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CNGA2Q16280 664 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SHROOM1Q2M3G4 852 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC157Q569K6 752 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 THEMIS2Q5TEJ8 643 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SULT6B1Q6IMI4 303 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CYP4F22Q6NT55 531 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 SHQ1Q6PI26 577 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 ELMSAN1Q6PJG2 1045 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 DCLRE1AQ6PJP8 1040 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 PLEKHM3Q6ZWE6 761 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 KCNK18Q7Z418 384 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 MCATQ8IVS2 390 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 KIAA2013Q8IYS2 634 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TAGAPQ8N103 731 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 C10orf53Q8N6V4 93 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 PPM1NQ8N819 430 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 UHMK1Q8TAS1 419 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 KIAA1524Q8TCG1 905 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 RIN2Q8WYP3 895 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 ATP6V0A1Q93050 837 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 RILPL2Q969X0 211 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 FAM120BQ96EK7 910 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CLMNQ96JQ2 1002 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TRIM47Q96LD4 638 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TMEM237Q96Q45 408 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 UIMC1Q96RL1 719 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 CITED2Q99967 270 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 BOCQ9BWV1 1114 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 GPR63Q9BZJ6 419 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 QRSL1Q9H0R6 528 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 C14orf93Q9H972 538 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 LIN28AQ9H9Z2 209 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 ZMAT3Q9HA38 289 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 GP6Q9HCN6 339 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 GPR27Q9NS67 375 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 TBX20Q9UMR3 447 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 AP1M2Q9Y6Q5 423 aa5.49□□□□□ -1.53
TOPBP1-210ENST00000572787 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC78A2IDD5 438 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 F8W8V4 182 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 AXIN1O15169 862 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PRPSAP2O60256 369 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 SYNCRIPO60506 623 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 KERAO60938 352 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PIAS2O75928 621 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 AFPP02771 609 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 OPN1MWP04001 364 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 NR3C2P08235 984 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 OPN1MW2P0DN77 364 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 OPN1MW3P0DN78 364 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC9A1P19634 815 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 FGFR2P21802 821 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CD40P25942 277 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 TMOD1P28289 359 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MAPK4P31152 587 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 HSPA1LP34931 641 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PHKA2P46019 1235 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 GPC3P51654 580 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 RRP1P56182 461 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PIP4K2BP78356 416 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MRPS9P82933 396 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 YWHAHQ04917 246 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 IKBKEQ14164 716 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PUM1Q14671 1186 aaKnown RBP eCLIP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 NAA25Q14CX7 972 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 KYNUQ16719 465 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MAP3K21Q5TCX8 1036 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CEP135Q66GS9 1140 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 DENND5AQ6IQ26 1287 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 NFRKBQ6P4R8 1299 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 Q6ZVU0 165 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 BBS12Q6ZW61 710 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 C16orf59Q7L2K0 433 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF804AQ7Z570 1209 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 R3HCC1LQ7Z5L2 792 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 SESTD1Q86VW0 696 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 RAB11FIP4Q86YS3 637 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 ARMC8Q8IUR7 673 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CRIPAKQ8N1N5 446 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 KREMEN2Q8NCW0 462 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 IL31RAQ8NI17 732 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CYP2W1Q8TAV3 490 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 THAP4Q8WY91 577 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 TBC1D5Q92609 795 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PTP4A1Q93096 173 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms