RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 C1RP00736 705 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 PROZP22891 400 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 TMEM132AQ24JP5 1023 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 DCAF4L1Q3SXM0 396 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 RILPL1Q5EBL4 403 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 RSPO2Q6UXX9 243 aaPredicted RBP19.92■□□□□ 0.78
CHD3-214ENST00000572579 OTOP3Q7RTS5 596 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 SUGP1Q8IWZ8 645 aaKnown RBP19.92■□□□□ 0.78
CHD3-214ENST00000572579 TMEM130Q8N3G9 435 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 C3orf58Q8NDZ4 430 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 HDAC7Q8WUI4 952 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 RSAD2Q8WXG1 361 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 PIK3R5Q8WYR1 880 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 ZBTB45Q96K62 511 aaPredicted RBP19.92■□□□□ 0.78
CHD3-214ENST00000572579 ADPGKQ9BRR6 497 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 NTPCRQ9BSD7 190 aaKnown RBP19.92■□□□□ 0.78
CHD3-214ENST00000572579 TTPALQ9BTX7 342 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 TMEM134Q9H6X4 195 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 GOLGA2P5Q9HBQ8 144 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.92■□□□□ 0.78
CHD3-214ENST00000572579 SF3B1O75533 1304 aaKnown RBP eCLIP19.92■□□□□ 0.78
CHD3-214ENST00000572579 MYO15AQ9UKN7 3530 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 NPHP3-ACAD11A0A0J9YXS1 232 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 SMIM28A0A1B0GU29 152 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 ST18O60284 1047 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 MRE11P49959 708 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 CLCNKBP51801 687 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 SLC12A3P55017 1021 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 RAD51AP2Q09MP3 1159 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 ARSHQ5FYA8 562 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 CEP57Q86XR8 500 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 TMEM105Q8N8V8 129 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 SMG7Q92540 1137 aaKnown RBP19.91■□□□□ 0.78
CHD3-214ENST00000572579 STK24Q9Y6E0 443 aa19.91■□□□□ 0.78
CHD3-214ENST00000572579 SLC16A4O15374 487 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 NARSO43776 548 aaKnown RBP19.9■□□□□ 0.78
CHD3-214ENST00000572579 NPR3P17342 541 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 GUCY2CP25092 1073 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 GRM5P41594 1212 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 OSTNP61366 133 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 GRIN1Q05586 938 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 ZRSR1Q15695 479 aaKnown RBP19.9■□□□□ 0.78
CHD3-214ENST00000572579 UPP1Q16831 310 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 TMEM119Q4V9L6 283 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 SYT2Q8N9I0 419 aaPredicted RBP19.9■□□□□ 0.78
CHD3-214ENST00000572579 ST13P5Q8NFI4 369 aaPredicted RBP19.9■□□□□ 0.78
CHD3-214ENST00000572579 TBC1D32Q96NH3 1257 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 RAB34Q9BZG1 259 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 PRKD2Q9BZL6 878 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 PLEKHA4Q9H4M7 779 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 PLXNA3P51805 1871 aa19.9■□□□□ 0.78
CHD3-214ENST00000572579 VWA3AA6NCI4 1184 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 I3L4J1 428 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 CLUHO75153 1309 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 ZMYND10O75800 440 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 FGFR3P22607 806 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 DMP1Q13316 513 aaPredicted RBP19.89■□□□□ 0.77
CHD3-214ENST00000572579 CYP26C1Q6V0L0 522 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 TMEM161BQ8NDZ6 487 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 ACSF2Q96CM8 615 aaPredicted RBP19.89■□□□□ 0.77
CHD3-214ENST00000572579 HAPLN2Q9GZV7 340 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 KMT5AQ9NQR1 393 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 EPS15L1Q9UBC2 864 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 FBXW11Q9UKB1 542 aa19.89■□□□□ 0.77
CHD3-214ENST00000572579 DENND4AQ7Z401 1863 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 PHLPP2Q6ZVD8 1323 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 TMEM189-UBE2V1I3L0A0 370 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 B3GAT3O94766 335 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 BRCC3P46736 316 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 NTHL1P78549 312 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
CHD3-214ENST00000572579 TDGQ13569 410 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 PSMD5Q16401 504 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 DCLRE1AQ6PJP8 1040 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 MRPL4Q9BYD3 311 aaKnown RBP19.88■□□□□ 0.77
CHD3-214ENST00000572579 ZDHHC7Q9NXF8 308 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 C2orf16Q68DN1 1984 aa19.88■□□□□ 0.77
CHD3-214ENST00000572579 TDRD15B5MCY1 1934 aaKnown RBP19.88■□□□□ 0.77
CHD3-214ENST00000572579 PI15O43692 258 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 PLA2G4BP0C869 781 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 TKTP29401 623 aaKnown RBP19.87■□□□□ 0.77
CHD3-214ENST00000572579 SEZ6Q53EL9 994 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 CWF19L1Q69YN2 538 aaKnown RBP19.87■□□□□ 0.77
CHD3-214ENST00000572579 SPIRE2Q8WWL2 714 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 C18orf25Q96B23 403 aaPredicted RBP19.87■□□□□ 0.77
CHD3-214ENST00000572579 DRC1Q96MC2 740 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 RPP25Q9BUL9 199 aaKnown RBP19.87■□□□□ 0.77
CHD3-214ENST00000572579 FAM86C1Q9NVL1 165 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 DUSP12Q9UNI6 340 aa19.87■□□□□ 0.77
CHD3-214ENST00000572579 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
CHD3-214ENST00000572579 H3BQV1 296 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 MAPTP10636 758 aaKnown RBP19.86■□□□□ 0.77
CHD3-214ENST00000572579 PLS3P13797 630 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 KCNE1P15382 129 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 GBP2P32456 591 aaPredicted RBP19.86■□□□□ 0.77
CHD3-214ENST00000572579 OR1D2P34982 312 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 PTPN5P54829 565 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 RAB33AQ14088 237 aa19.86■□□□□ 0.77
CHD3-214ENST00000572579 SLC10A6Q3KNW5 377 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms