RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 CDT1Q9H211 546 aa12.99□□□□□ -0.33
TOM1L1-213ENST00000572405 PRMT7Q9NVM4 692 aaPredicted RBP12.99□□□□□ -0.33
TOM1L1-213ENST00000572405 NAGPAQ9UK23 515 aa12.99□□□□□ -0.33
TOM1L1-213ENST00000572405 PJA2O43164 708 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 VNN1O95497 513 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 CYBAP13498 195 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 AKR1A1P14550 325 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 TRIM32Q13049 653 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 SCARA3Q6AZY7 606 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 SYT11Q9BT88 431 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 GINS2Q9Y248 185 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 V9GYY5 206 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 NRCAMQ92823 1304 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 BRCA2P51587 3418 aa12.98□□□□□ -0.33
TOM1L1-213ENST00000572405 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ENC1O14682 589 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 SLU7O95391 586 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 TFRCP02786 760 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 FGFR4P22455 802 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 PSEN2P49810 448 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 POU5F1BQ06416 359 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 KIF22Q14807 665 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 SPOPLQ6IQ16 392 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 RUFY4Q6ZNE9 571 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 SLC20A1Q8WUM9 679 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ARID3AQ99856 593 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 NENFQ9UMX5 172 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 TNFSF13BQ9Y275 285 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 GPR25O00155 361 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 BUB1O43683 1085 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ZEB2O60315 1214 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ARF4P18085 180 aaPredicted RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 MFAP3P55082 362 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 FAM187BQ17R55 369 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 DEFB115Q30KQ5 88 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 SHC3Q92529 594 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 PDZD7Q9H5P4 517 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
TOM1L1-213ENST00000572405 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 HAS3O00219 553 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 ATP1A1P05023 1023 aaKnown RBP12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 CXCL8P10145 99 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 ANXA13P27216 316 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 NAB2Q15742 525 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 MFSD14CQ5VZR4 134 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 FAM71AQ8IYT1 594 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 SEPT11Q9NVA2 429 aaKnown RBP12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 HDAC6Q9UBN7 1215 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 Q9Y3F1 56 aa12.96□□□□□ -0.33
TOM1L1-213ENST00000572405 MBLAC1A4D2B0 266 aaPredicted RBP12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 TMCO5BA8MYB1 307 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 CYP26A1O43174 497 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 TSPAN1O60635 241 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 CLSTN1O94985 981 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 SGPL1O95470 568 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 CCDC172P0C7W6 258 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 CYP2C9P11712 490 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 APOBEC3GQ9HC16 384 aaKnown RBP12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 MYH10P35580 1976 aa12.96□□□□□ -0.34
TOM1L1-213ENST00000572405 DYNC1I1O14576 645 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 TREHO43280 583 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 PHACTR2O75167 634 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 DUSP11O75319 330 aaKnown RBP12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 ERLIN2O94905 339 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 PGK1P00558 417 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 NAP1L1P55209 391 aaKnown RBP12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 NCOA4Q13772 614 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 ZNF410Q86VK4 478 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 SLC47A2Q86VL8 602 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 WDR49Q8IV35 697 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 EFCAB13Q8IY85 973 aa12.95□□□□□ -0.34
TOM1L1-213ENST00000572405 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms