RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PLXNA4Q9HCM2 1894 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 TTC26A0AVF1 554 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 FSCN2O14926 492 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 OGTO15294 1046 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 TGFB1I1O43294 461 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CSPG5O95196 566 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 MYL1P05976 194 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CLTAP09496 248 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 KCNE1P15382 129 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 MATR3P43243 847 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 OR1G1P47890 313 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 ACOT2P49753 483 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 KRT17Q04695 432 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 UBE3AQ05086 875 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 FAM160A1Q05DH4 1040 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 SPAG1Q07617 926 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 GRIK3Q13003 919 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 ZBTB6Q15916 424 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 PTPROQ16827 1216 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 TCEAL5Q5H9L2 206 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 APBB1IPQ7Z5R6 666 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 ADGRD2Q7Z7M1 963 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 DDX53Q86TM3 631 aaKnown RBP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 RNF168Q8IYW5 571 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 MICALL1Q8N3F8 863 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 KIAA0895Q8NCT3 520 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 SNX27Q96L92 541 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 MSTO1Q9BUK6 570 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 TMEM206Q9H813 350 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 EXOC7Q9UPT5 735 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 LZTS1Q9Y250 596 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 ZMYM2Q9UBW7 1377 aa9.49□□□□□ -0.89
TRAPPC1-203ENST00000571739 CHD9Q3L8U1 2897 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 CASTOR2A6NHX0 329 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 HIDE1A8MVS5 230 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 LACTBL1A8MY62 500 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 EIF3DO15371 548 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 LILRB3O75022 631 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 CXCL8P10145 99 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PPM1AP35813 382 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 YARSP54577 528 aaKnown RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 WNT7BP56706 349 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PSMD2Q13200 908 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 TUSC3Q13454 348 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PNOCQ13519 176 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 ALCAMQ13740 583 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 POSTNQ15063 836 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 ENOX2Q16206 610 aaKnown RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 MICAL1Q8TDZ2 1067 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 POMGNT1Q8WZA1 660 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 ERCC4Q92889 916 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 C18orf25Q96B23 403 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 TIGD1Q96MW7 591 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 CBWD1Q9BRT8 395 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 COLEC11Q9BWP8 271 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 GPR62Q9BZJ7 368 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 NSUN3Q9H649 340 aaKnown RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 TLR9Q9NR96 1032 aa9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 AGO2Q9UKV8 859 aaKnown RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 PRG3Q9Y2Y8 225 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC1-203ENST00000571739 TDRD15B5MCY1 1934 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 GOLGA8IPA6NC78 632 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 GOLGA8JA6NMD2 632 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 PER2O15055 1255 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 RHOBTB3O94955 611 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 CXCL14O95715 111 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 GARTP22102 1010 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 LTBRP36941 435 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 CLCNKBP51801 687 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 HYAL1Q12794 435 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 COL19A1Q14993 1142 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 KYAT1Q16773 422 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 UPP1Q16831 310 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 BMT2Q1RMZ1 405 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 SCARA3Q6AZY7 606 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 TMC7Q7Z402 723 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 RBM23Q86U06 439 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 NELFCDQ8IXH7 590 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 ELOA2Q8IYF1 753 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 MRPL43Q8N983 215 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 SPATA20Q8TB22 786 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 AUTS2Q8WXX7 1259 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 SAAL1Q96ER3 474 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 TMEM169Q96HH4 297 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms