RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 BRF1Q92994 677 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 FAM20AQ96MK3 541 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 LXNQ9BS40 222 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
CHMP6-202ENST00000571457 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 NPTXRO95502 500 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 IGF2RP11717 2491 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 TDGF1P13385 188 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 CNR2P34972 360 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 MBTD1Q05BQ5 628 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 RAB33AQ14088 237 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 SIM2Q14190 667 aaPredicted RBP12.58□□□□□ -0.4
CHMP6-202ENST00000571457 NTRK3Q16288 839 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 AMHR2Q16671 573 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 RALGAPA1Q6GYQ0 2036 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 GALNT17Q6IS24 598 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 PRR23CQ6ZRP0 262 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
CHMP6-202ENST00000571457 ING5Q8WYH8 240 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 MCRS1Q96EZ8 462 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 NFKBIZQ9BYH8 718 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 ZSWIM4Q9H7M6 989 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 KLK14Q9P0G3 267 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 DNMT3BQ9UBC3 853 aaKnown RBP12.58□□□□□ -0.4
CHMP6-202ENST00000571457 VAV3Q9UKW4 847 aa12.58□□□□□ -0.4
CHMP6-202ENST00000571457 NDRG2Q9UN36 371 aaKnown RBP12.58□□□□□ -0.4
CHMP6-202ENST00000571457 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 KIF4AO95239 1232 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 KCNA4P22459 653 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 OR1D2P34982 312 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 CXCL12P48061 93 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 EPHA7Q15375 998 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 IL31Q6EBC2 164 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
CHMP6-202ENST00000571457 Q6ZUG5 572 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 HASPINQ8TF76 798 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 IRF7Q92985 503 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 PAAF1Q9BRP4 392 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 AVENQ9NQS1 362 aaPredicted RBP12.57□□□□□ -0.4
CHMP6-202ENST00000571457 WRAP73Q9P2S5 460 aaPredicted RBP12.57□□□□□ -0.4
CHMP6-202ENST00000571457 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
CHMP6-202ENST00000571457 FRYQ5TBA9 3013 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 CASTOR2A6NHX0 329 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 ADAM12O43184 909 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 SLC37A4O43826 429 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 MARCH6O60337 910 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 THP07101 528 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 RHOP08100 348 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
CHMP6-202ENST00000571457 PTPN2P17706 415 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 TANGO2Q6ICL3 276 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.56□□□□□ -0.4
CHMP6-202ENST00000571457 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 DAGLBQ8NCG7 672 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 FAM3CQ92520 227 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
CHMP6-202ENST00000571457 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 ZFP14Q9HCL3 533 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 KCNMB3Q9NPA1 279 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
CHMP6-202ENST00000571457 SHISA7A6NL88 538 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 M0R2N6 131 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 ZNF197O14709 1029 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 TBX3O15119 743 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 B4GALT5O43286 388 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 TRAPPC3O43617 180 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 DGAT1O75907 488 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 MICAL2O94851 1124 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 LRG1P02750 347 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 FGFR3P22607 806 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 SHC2P98077 582 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
CHMP6-202ENST00000571457 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 CAPSQ13938 189 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 INF2Q27J81 1249 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 PPP4R3AQ6IN85 833 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 C1orf228Q6PIY5 440 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 BLOC1S2Q6QNY1 142 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 ANKS3Q6ZW76 656 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 SPEM1Q8N4L4 309 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 PRIMPOLQ96LW4 560 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
CHMP6-202ENST00000571457 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
CHMP6-202ENST00000571457 XPNPEP1Q9NQW7 623 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 RGL1Q9NZL6 768 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 CACNG4Q9UBN1 327 aa12.55□□□□□ -0.4
CHMP6-202ENST00000571457 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms