RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 C6P13671 934 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 GLUD2P49448 558 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 IRX6P78412 446 aaPredicted RBP7.86□□□□□ -1.15
CHD3-213ENST00000571249 CCINQ13939 588 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 PON2Q15165 354 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 PABPC1LQ4VXU2 614 aaKnown RBP7.86□□□□□ -1.15
CHD3-213ENST00000571249 DGKKQ5KSL6 1271 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 VITQ6UXI7 678 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 TOGARAM2Q6ZUX3 1019 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 CYP2U1Q7Z449 544 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 ITPRIPQ8IWB1 547 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 HERC2P3Q9BVR0 1158 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 PRG3Q9Y2Y8 225 aaPredicted RBP7.86□□□□□ -1.15
CHD3-213ENST00000571249 MRPS23Q9Y3D9 190 aaKnown RBP7.86□□□□□ -1.15
CHD3-213ENST00000571249 BOD1L1Q8NFC6 3051 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 MTORP42345 2549 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 FRMPD4Q14CM0 1322 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 EVPLQ92817 2033 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 ARNTLO00327 626 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 TLX3O43711 291 aaPredicted RBP7.85□□□□□ -1.15
CHD3-213ENST00000571249 RAB11FIP3O75154 756 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 CSDE1O75534 798 aaKnown RBP7.85□□□□□ -1.15
CHD3-213ENST00000571249 EFEMP2O95967 443 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 C8AP07357 584 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 CEBPBP17676 345 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 BCKDHBP21953 392 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 ADSSP30520 456 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 VIPR2P41587 438 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 STAT5BP51692 787 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 DSG1Q02413 1049 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 LMAN2Q12907 356 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 ASPRV1Q53RT3 343 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 PMS2CLQ68D20 193 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 GLB1LQ6UWU2 654 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 TMPRSS7Q7RTY8 843 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 PLPPR4Q7Z2D5 763 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 HDDC3Q8N4P3 179 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 ZSWIM3Q96MP5 696 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 ZKSCAN3Q9BRR0 538 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 GTPBP2Q9BX10 602 aaKnown RBP7.85□□□□□ -1.15
CHD3-213ENST00000571249 ZFP14Q9HCL3 533 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 TRPV5Q9NQA5 729 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 SLC8A2Q9UPR5 921 aa7.85□□□□□ -1.15
CHD3-213ENST00000571249 CABIN1Q9Y6J0 2220 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 THADAQ6YHU6 1953 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 MYH7P12883 1935 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ZBTB5O15062 677 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ATG7O95352 703 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PARP1P09874 1014 aaKnown RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 MYF5P13349 255 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PSMC3P17980 439 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PHKA2P46019 1235 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 DHPSP49366 369 aaPredicted RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 KPNA1P52294 538 aaPredicted RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 CXADRP78310 365 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PPM1LQ5SGD2 360 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ZKSCAN2Q63HK3 967 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PCNX4Q63HM2 1172 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PRSS55Q6UWB4 352 aaPredicted RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 DGKHQ86XP1 1220 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 RNF168Q8IYW5 571 aaPredicted RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 RSPH1Q8WYR4 309 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 GPRASP2Q96D09 838 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 TCEAL4Q96EI5 215 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 MBOAT7Q96N66 472 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 NUSAP1Q9BXS6 441 aaKnown RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 KAT14Q9H8E8 782 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 CHST7Q9NS84 486 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ECHDC1Q9NTX5 307 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 DACT1Q9NYF0 836 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 GDE1Q9NZC3 331 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 EVLQ9UI08 416 aaPredicted RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 FBXW11Q9UKB1 542 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 PCDHB15Q9Y5E8 787 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
CHD3-213ENST00000571249 TLN1Q9Y490 2541 aaKnown RBP7.84□□□□□ -1.15
CHD3-213ENST00000571249 ADAMTS9Q9P2N4 1935 aa7.84□□□□□ -1.16
CHD3-213ENST00000571249 ICE1Q9Y2F5 2266 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 PCNX1Q96RV3 2341 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 PALM3A6NDB9 673 aaPredicted RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 SPECC1L-ADORA2AF8WAN1 911 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 ZNF263O14978 683 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 HBP1O60381 514 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 C1RP00736 705 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 POMCP01189 267 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 HNRNPA1P09651 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHD3-213ENST00000571249 ITGB5P18084 799 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 EIF4BP23588 611 aaKnown RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 IL12RB1P42701 662 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 NLRP11P59045 1033 aaKnown RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 UBAP2LQ14157 1087 aaKnown RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 GRM4Q14833 912 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 LRRC69Q6ZNQ3 347 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms